Pre_GI: BLASTP Hits

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Query: NC_002947:2157648:2181724 Pseudomonas putida KT2440, complete genome

Start: 2181724, End: 2182032, Length: 309

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010322:1817598:183312418331241833405282Pseudomonas putida GB-1 chromosome, complete genomeXRE family transcriptional regulator1e-36151
NC_008686:405159:424675424675424929255Paracoccus denitrificans PD1222 chromosome 1, complete sequencehelix-turn-helix domain protein2e-0960.8
NC_017986:2548720:256271225627122563032321Pseudomonas putida ND6 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0858.5
NC_010322:4623867:466672646667264667013288Pseudomonas putida GB-1 chromosome, complete genomeXRE family transcriptional regulator1e-0858.5
NC_010170:4800000:481912848191284819427300Bordetella petrii, complete genomepredicted transcriptional regulator7e-0855.8
NC_010322:583842:594787594787595062276Pseudomonas putida GB-1 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0755.5
NC_008577:1455000:147510214751021475392291Shewanella sp. ANA-3 chromosome 1, complete sequencetranscriptional regulator, XRE family2e-0754.7
NC_015381:2859000:289856828985682898861294Burkholderia gladioli BSR3 chromosome 1, complete sequenceXRE family transcriptional regulator2e-0754.3
NC_008752:725189:744058744058744351294Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, XRE family2e-0754.3
NC_020829:4429435:445048844504884450811324Pseudomonas denitrificans ATCC 13867, complete genometranscriptional regulator6e-0752.8
NC_003295:2787371:281222328122232812513291Ralstonia solanacearum GMI1000, complete genomePUTATIVE TRANSCRIPTION REGULATOR PROTEIN6e-0752.8