Pre_GI: BLASTP Hits

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Query: NC_002506:324552:341170 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete

Start: 341170, End: 341799, Length: 630

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016446:49618:662416624166864624Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein3e-121433
NC_016945:324519:340992340992341615624Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein7e-121432
NC_014387:2297304:230261223026122303211600Butyrivibrio proteoclasticus B316 chromosome 1, complete genomehypothetical protein4e-53207
NC_014393:4612301:463135746313574631950594Clostridium cellulovorans 743B chromosome, complete genomehypothetical protein3e-52204
NC_004578:895019:907933907933908535603Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein5e-44177
NC_017098:2562131:256915025691502569731582Spirochaeta africana DSM 8902 chromosome, complete genomehypothetical protein2e-41168
NC_005773:4282840:430908743090874309545459Pseudomonas syringae pv. phaseolicola 1448A, complete genomeProtein of unknown function (DUF1349) superfamily2e-32138
NC_016514:506611:532056532056532628573Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein8e-25113
NC_011283:785973:806184806184806756573Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein2e-22105
NC_011415:308825:312284312284312859576Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-22105
NC_007005:4515853:454425845442584544833576Pseudomonas syringae pv. syringae B728a, complete genomeProtein of unknown function DUF13492e-22105
NC_015556:2265940:229969022996902300274585Pseudomonas fulva 12-X chromosome, complete genomeprotein of unknown function DUF13494e-22104
NC_009348:3261500:326565332656533266234582Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein9e-22103
NC_015424:3112637:315979831597983160379582Aeromonas veronii B565 chromosome, complete genomehypothetical protein3e-21101
NC_005773:1675793:169055516905551691130576Pseudomonas syringae pv. phaseolicola 1448A, complete genomeProtein of unknown function (DUF1349) superfamily3e-21101
NC_014623:1074299:112778311277831128478696Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein5e-21100
NC_014562:469154:481534481534482130597Pantoea vagans C9-1 chromosome, complete genomehypothetical protein1e-1996.7
NC_020209:1986503:201996520199652020588624Pseudomonas poae RE*1-1-14, complete genomehypothetical protein2e-1892.8
NC_019673:967559:972053972053972616564Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-1376.6
NC_010001:1745089:176938117693811769956576Clostridium phytofermentans ISDg, complete genomeprotein of unknown function DUF13492e-1272.8
NC_014151:657382:661789661789662415627Cellulomonas flavigena DSM 20109 chromosome, complete genomeprotein of unknown function DUF13496e-0857.8