Pre_GI: BLASTP Hits

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Query: NC_002506:298868:298868 Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete

Start: 298868, End: 300000, Length: 1133

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012667:1045782:1060376106037610615061131Vibrio cholerae MJ-1236 chromosome 2, complete genomeaminomethyltransferase (glycine cleavage system T protein)2e-32139
NC_014966:795311:8165458165458176781134Vibrio vulnificus MO6-24/O chromosome II, complete sequenceaminomethyltransferase (glycine cleavage system T protein)5e-27122
NC_015161:2060369:2076112207611220772931182Deinococcus proteolyticus MRP chromosome, complete genomeAminomethyltransferase8e-1685.1
NC_015380:859424:8681378681378692311095Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomeaminomethyltransferase (glycine cleavage system T protein)2e-1583.6
NC_012489:2913920:2928677292867729298011125Gemmatimonas aurantiaca T-27, complete genomeaminomethyltransferase4e-1479.7
NC_008025:1998500:2001903200190320030271125Deinococcus geothermalis DSM 11300, complete genomeglycine cleavage system T protein2e-1377
NC_010001:1884500:1888747188874718898291083Clostridium phytofermentans ISDg, complete genomeglycine cleavage system T protein3e-1376.6
NC_020409:437781:4691374691374702221086Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeAminomethyltransferase1e-1274.7
NC_010162:2717741:2734044273404427351651122Sorangium cellulosum 'So ce 56', complete genomeaminomethyltransferase2e-1273.9
NC_020125:1545578:1566512156651215675911080Riemerella anatipestifer RA-CH-2, complete genomeGlycine cleavage system T protein (aminomethyltransferase)2e-1273.6
NC_013169:1661135:1677258167725816783761119Kytococcus sedentarius DSM 20547, complete genomeaminomethyltransferase8e-1271.6
NC_005070:2308363:2327908232790823290111104Synechococcus sp. WH 8102, complete genomeputative Glycine cleavage T-protein (aminomethyl transferase)2e-1067.4
NC_008820:2595500:2611496261149626126201125Prochlorococcus marinus str. MIT 9303, complete genomeputative Glycine cleavage T-protein (aminomethyl transferase)2e-1066.6
NC_016629:3396500:3410955341095534120401086Desulfovibrio africanus str. Walvis Bay chromosome, completeglycine cleavage system T protein3e-1066.6
NC_017167:1648913:1648913164891316500251113Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1glycine cleavage system T protein3e-1066.2
NC_014219:2509062:2511883251188325129771095Bacillus selenitireducens MLS10 chromosome, complete genomeglycine cleavage system T protein5e-1065.9
NC_011295:929293:9473939473939484781086Coprothermobacter proteolyticus DSM 5265, complete genomeglycine cleavage system T protein6e-1065.5
NC_015499:1167932:1188787118878711898781092Thermodesulfobium narugense DSM 14796 chromosome, complete genomeglycine cleavage system T protein7e-1065.5
NC_019892:6645515:6649049664904966501671119Singulisphaera acidiphila DSM 18658 chromosome, complete genomeglycine cleavage system T protein9e-1065.1
NC_002607:1178690:1195790119579011969531164Halobacterium sp. NRC-1, complete genomeGcvT11e-0964.7
NC_016584:4961688:4988434498843449895551122Desulfosporosinus orientis DSM 765 chromosome, complete genomeglycine cleavage system T protein3e-0963.5
NC_014815:4621552:4643042464304246441691128Micromonospora sp. L5 chromosome, complete genomeglycine cleavage system t protein4e-0962.8
NC_017501:1750580:1774511177451117756111101Neisseria meningitidis 8013, complete genomeglycine cleavage system T protein (aminomethyltransferase)5e-0962.4
NC_009091:1598044:1604061160406116051731113Prochlorococcus marinus str. MIT 9301, complete genomeputative Glycine cleavage T-protein (aminomethyl transferase)8e-0962
NC_019940:1837863:1854008185400818551141107Thioflavicoccus mobilis 8321 chromosome, complete genomeglycine cleavage system T protein2e-0860.8
NC_009076:3876733:3898169389816938992871119Burkholderia pseudomallei 1106a chromosome I, complete sequenceglycine cleavage system T protein2e-0860.5
NC_007434:111607:1327281327281339241197Burkholderia pseudomallei 1710b chromosome I, complete sequenceaminomethyltransferase2e-0860.5
NC_017514:1640355:1665215166521516663151101Neisseria meningitidis M01-240149 chromosome, complete genomeglycine cleavage system T protein2e-0860.1
NC_007516:2383097:2404838240483824059651128Synechococcus sp. CC9605, complete genomeglycine cleavage system T protein4e-0859.3
NC_018691:318662:3203513203513214451095Alcanivorax dieselolei B5 chromosome, complete genomeAminomethyltransferase6e-0858.9
NC_020302:2116468:2116468211646821175681101Corynebacterium halotolerans YIM 70093 = DSM 44683, completeglycine cleavage system T protein7e-0858.5
NC_005877:509877:5318045318045329011098Picrophilus torridus DSM 9790, complete genomeaminomethyltransferase1e-0757.8
NC_007517:3524715:3550507355050735515951089Geobacter metallireducens GS-15, complete genomeGlycine cleavage system T protein3e-0756.6
NC_015222:1843093:1863993186399318650751083Nitrosomonas sp. AL212 chromosome, complete genomeAminomethyltransferase5e-0755.8
NC_009482:2109270:2127733212773321288121080Synechococcus sp. RCC307 chromosome, complete genomeglycine cleavage system aminomethyltransferase T7e-0755.1
NC_008346:2251353:2261296226129622623961101Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeAminomethyltransferase9e-0755.1
NC_006512:2211654:2228851222885122299301080Idiomarina loihiensis L2TR, complete genomeaminomethyltransferase9e-0755.1
NC_020541:625925:6535136535136546131101Rhodanobacter sp. 2APBS1, complete genomeaminomethyltransferase2e-0653.5
NC_015680:663341:6658036658036670081206Pyrococcus yayanosii CH1 chromosome, complete genomeglycine cleavage system aminomethyltransferase T4e-0653.1
NC_016111:4588021:4606388460638846075151128Streptomyces cattleya NRRL 8057, complete genomeglycine cleavage system protein T4e-0652.8