Pre_GI: BLASTP Hits

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Query: NC_002505:238569:263536 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

Start: 263536, End: 264219, Length: 684

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:2663837:268732426873242688226903Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeRfbT-related protein8e-130462
NC_012578:224559:248086248086248946861Vibrio cholerae M66-2 chromosome I, complete sequencerfbT-like protein2e-129461
NC_012668:368305:376021376021376839819Vibrio cholerae MJ-1236 chromosome 1, complete sequenceRfbT protein2e-129461
NC_012582:272320:295841295841296701861Vibrio cholerae O395 chromosome chromosome I, complete sequencerfbT-related protein2e-128457
NC_009457:2764972:278849327884932789353861Vibrio cholerae O395 chromosome 2, complete sequenceRfbT protein2e-128457
NC_016944:238580:263574263574264230657Vibrio cholerae IEC224 chromosome I, complete sequencerfbT protein9e-126449
NC_011884:2051723:206894220689422069712771Cyanothece sp. PCC 7425, complete genomemethyltransferase FkbM family1e-0963.2
NC_015186:347346:367887367887368660774Acidiphilium multivorum AIU301, complete genomemethyltransferase FkbM family protein2e-0859.7
NC_009484:318500:3366313366313379951365Acidiphilium cryptum JF-5 chromosome, complete genomeFkbM family methyltransferase3e-0858.5
NC_014006:2999500:3008749300874930103171569Sphingobium japonicum UT26S chromosome 1, complete genomeputative methyltransferase4e-0755.1
NC_002977:1198438:120779412077941208579786Methylococcus capsulatus str. Bath, complete genomehypothetical protein7e-0754.3
NC_014205:842314:857464857464858288825Staphylothermus hellenicus DSM 12710 chromosome, complete genomemethyltransferase FkbM family3e-0652
NC_006834:787500:793593793593794393801Xanthomonas oryzae pv. oryzae KACC10331, complete genomehypothetical protein3e-0652
NC_010717:4626178:464146146414614642261801Xanthomonas oryzae pv. oryzae PXO99A, complete genomeputative methyltransferase3e-0652
NC_007705:755948:762025762025762753729Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomehypothetical protein3e-0652
NC_013743:3020687:303259730325973033412816Haloterrigena turkmenica DSM 5511, complete genomemethyltransferase FkbM family4e-0651.6