Pre_GI: BLASTP Hits

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Query: NC_002505:1892430:1902898 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

Start: 1902898, End: 1903632, Length: 735

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:1937645:194920619492061949940735Vibrio cholerae IEC224 chromosome I, complete sequencechemotaxis protein MotB-likeprotein3e-131467
NC_016445:1363831:137429813742981375032735Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completechemotaxis protein MotB-related protein3e-131467
NC_012668:1688500:174387617438761744610735Vibrio cholerae MJ-1236 chromosome 1, complete sequencechemotaxis protein MotB-related protein3e-131467
NC_012582:1976962:198742019874201988154735Vibrio cholerae O395 chromosome chromosome I, complete sequencechemotaxis protein MotB-related protein3e-131467
NC_012578:1838470:185003118500311850765735Vibrio cholerae M66-2 chromosome I, complete sequencechemotaxis protein MotB-like protein3e-131467
NC_009457:1444449:145600114560011456735735Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein3e-131467
NC_008577:4533574:454691745469174547648732Shewanella sp. ANA-3 chromosome 1, complete sequencechemotaxis protein MotB-related protein2e-75281
NC_007645:3756654:376473437647343765525792Hahella chejuensis KCTC 2396, complete genomeFlagellar motor protein3e-53208
NC_009656:6224221:623753462375346238298765Pseudomonas aeruginosa PA7 chromosome, complete genomeflagellar motor protein2e-44179
NC_009434:1580205:158255615825561583320765Pseudomonas stutzeri A1501, complete genomechemotaxis protein MotB-related protein7e-44177
NC_015588:939037:940578940578941411834Isoptericola variabilis 225 chromosome, complete genomeOmpA/MotB domain protein4e-33141
NC_019940:1963000:196687619668761967727852Thioflavicoccus mobilis 8321 chromosome, complete genomeflagellar motor protein2e-1582.8
NC_015730:1799500:181490718149071815878972Roseobacter litoralis Och 149 chromosome, complete genomehypothetical protein2e-0963.2
NC_014010:175500:187228187228188040813Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeOmpA/MotB domain protein1e-0860.1
NC_015580:293803:304930304930305706777Novosphingobium sp. PP1Y, complete genomeOmpA/MotB domain-containing protein4e-0858.2
NC_016816:3974895:398104439810443981907864Pantoea ananatis LMG 5342, complete genomeOmpA/MotB domain-containing protein2e-0652.8