Pre_GI: BLASTP Hits

Some Help

Query: NC_001263:2574755:2590036 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 2590036, End: 2590593, Length: 558

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014974:246404:269445269445270002558Thermus scotoductus SA-01 chromosome, complete genomehypothetical protein2e-39161
NC_009699:3217315:321860032186003219169570Clostridium botulinum F str. Langeland chromosome, complete genomeHDIG domain-containing protein7e-1373.6
NC_009698:3046833:304811830481183048687570Clostridium botulinum A str. Hall chromosome, complete genomeHDIG domain-containing protein8e-1373.2
NC_010516:3234791:323607632360763236645570Clostridium botulinum B1 str. Okra, complete genomeHDIG domain protein8e-1373.2
NC_020134:1328302:133023913302391330820582Clostridium stercorarium subsp. stercorarium DSM 8532, completemetal dependent phosphohydrolase2e-1168.9
NC_014220:1732254:175122217512221751818597Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomemetal dependent phosphohydrolase1e-1065.9
NC_018515:4196409:419958241995824200178597Desulfosporosinus meridiei DSM 13257 chromosome, complete genomemetal dependent phosphohydrolase3e-1065.1
NC_005125:839000:840064840064840663600Gloeobacter violaceus PCC 7421, complete genomehypothetical protein5e-0857.4
NC_015873:2260048:227961722796172280213597Megasphaera elsdenii DSM 20460, complete genomeputative HD superfamily hydrolase1e-0755.8