Pre_GI: OUP Neighbours

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Query: NC_014922:825396 Haemophilus influenzae F3047 chromosome, complete genome

D: 30.1445

Host Lineage: Haemophilus influenzae; Haemophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria

General Information: A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism was first isolated in the 1890s during an influenza pandemic by Pfeiffer, and was originally thought to be the source of influenza, although later it was shown to be a secondary pathogen and may be synergistic with the influenza virus. This bacterium is one of the leading causes of meningitis in young children, and it may also cause septicemia, otitis media (inflammation of the middle ear), sinusitis (inflammation of the sinus cavity) and chronic bronchitis. It is highly adapted to its human host and typically lives in the nasopharynx and is a major cause of lower respiratory infections in infants and small children in developing countries (type 1b strain), although vaccine use has resulted in the decline of infections. The encapsulated organism can penetrate the blood and avoid both phagocytosis and complement-mediated lysis. All known strains produce neuraminidase and an IgA protease as well as fimbrial adhesins for attachment.

Number of Neighbours: 23




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_013766:757987Listeria monocytogenes 08-5578 chromosome, complete genome76.5012 %Subject ←→ Query21.6318
NC_016052:842762Tetragenococcus halophilus NBRC 12172, complete genome75.9804 %Subject ←→ Query21.9417
NC_003210:721824Listeria monocytogenes EGD-e, complete genome77.0895 %Subject ←→ Query22.1346
NC_013768:1983711Listeria monocytogenes 08-5923, complete genome75.5147 %Subject ←→ Query22.2499
NC_012488:453431Listeria monocytogenes Clip81459, complete genome77.1783 %Subject ←→ Query22.4617
NC_002973:730942Listeria monocytogenes str. 4b F2365, complete genome75.723 %Subject ←→ Query22.6302
NC_010519:445936Haemophilus somnus 2336 chromosome, complete genome75.1808 %Subject ←→ Query23.2855
NC_011660:1889504Listeria monocytogenes HCC23 chromosome, complete genome75.6863 %Subject ←→ Query23.6169
NC_013768:721897Listeria monocytogenes 08-5923, complete genome76.1274 %Subject ←→ Query23.7536
NC_010519:1802294*Haemophilus somnus 2336 chromosome, complete genome76.6636 %Subject ←→ Query24.1488
NC_010519:796229Haemophilus somnus 2336 chromosome, complete genome76.3909 %Subject ←→ Query25.037
NC_010519:2033980*Haemophilus somnus 2336 chromosome, complete genome77.3039 %Subject ←→ Query25.683
NC_010519:71365Haemophilus somnus 2336 chromosome, complete genome77.5061 %Subject ←→ Query26.3581
NC_010519:1165418Haemophilus somnus 2336 chromosome, complete genome76.1673 %Subject ←→ Query26.5151
NC_010519:416658*Haemophilus somnus 2336 chromosome, complete genome77.7206 %Subject ←→ Query27.2413
NC_012488:732233Listeria monocytogenes Clip81459, complete genome75.9314 %Subject ←→ Query27.4501
NC_013768:418000Listeria monocytogenes 08-5923, complete genome78.6397 %Subject ←→ Query28.129
NC_013766:417991Listeria monocytogenes 08-5578 chromosome, complete genome78.6765 %Subject ←→ Query28.129
NC_017316:1840462*Enterococcus faecalis OG1RF chromosome, complete genome75.5239 %Subject ←→ Query31.1734
NC_011660:2175537Listeria monocytogenes HCC23 chromosome, complete genome78.22 %Subject ←→ Query31.4081
NC_016809:1778000Haemophilus influenzae 10810, complete genome84.2279 %Subject ←→ Query31.4851
NC_009567:904922*Haemophilus influenzae PittGG chromosome, complete genome90.1501 %Subject ←→ Query33.0055
NC_016808:1335087Pasteurella multocida 36950 chromosome, complete genome75.674 %Subject ←→ Query35.9035