Pre_GI: OUP Neighbours

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Query: NC_006510:1731939 Geobacillus kaustophilus HTA426, complete genome

D: 41.4725

Host Lineage: Geobacillus kaustophilus; Geobacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Geobacillus kaustophilus strain HTA426 was first isolated from deep sea sediment of the Mariana Trench in the Pacific Ocean and belongs to a closely related group of thermophilic Bacillus spp. Members of this genus were originally classified as Bacillus. Recent rDNA analysis and DNA-DNA hybridization studies using spore-forming thermophilic subsurface isolates provided enough evidence to define the phylogenetically distinct, physiologically and morphologically consistent taxon Geobacillus. Geobacillus species are chemo-organotrophic, obligately thermophilic, motile, spore-forming, aerobic or facultatively anaerobic. This organism was compared with mesophilic Bacillus spp. to identify genome characteristics and specific genes related to thermophilia. Analysis of the amino acid compositions showed clear differences between Geobacillus kaustophilus and the mesophilic bacilli. In addition, the higher G+C content in Geobacillus kaustophilus rRNA also appears correlated to thermophilia. In addition, tRNA modification by the Geobacillus kaustophilus specific tRNA methyltransferases probably aids in the thermoadaptation of this organism.

Number of Neighbours: 69




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_006510:310212*Geobacillus kaustophilus HTA426, complete genome87.2181 %Subject ←→ Query37.0244
NC_014915:595569Geobacillus sp. Y412MC52 chromosome, complete genome86.829 %Subject ←→ Query41.0221
NC_013411:1454465Geobacillus sp. Y412MC61, complete genome86.7953 %Subject ←→ Query39.8118
NC_006510:1014500*Geobacillus kaustophilus HTA426, complete genome84.6752 %Subject ←→ Query39.7198
NC_006510:746814Geobacillus kaustophilus HTA426, complete genome84.6507 %Subject → Query29.7149
NC_013411:1168049*Geobacillus sp. Y412MC61, complete genome84.1452 %Subject → Query30.6232
NC_014915:308056*Geobacillus sp. Y412MC52 chromosome, complete genome84.1452 %Subject → Query30.3414
NC_013411:2975364Geobacillus sp. Y412MC61, complete genome83.7347 %Subject ←→ Query35.9085
NC_006510:2044347Geobacillus kaustophilus HTA426, complete genome83.4099 %Subject ←→ Query36.7248
NC_014915:2092678Geobacillus sp. Y412MC52 chromosome, complete genome83.1464 %Subject ←→ Query33.7161
NC_014915:1909275Geobacillus sp. Y412MC52 chromosome, complete genome82.5368 %Subject ←→ Query36.0595
NC_006510:372826*Geobacillus kaustophilus HTA426, complete genome82.117 %Subject ←→ Query33.0492
NC_006510:2778777Geobacillus kaustophilus HTA426, complete genome82.0006 %Subject ←→ Query31.9066
NC_013411:2767400Geobacillus sp. Y412MC61, complete genome81.5196 %Subject ←→ Query32.8925
NC_013411:2739989Geobacillus sp. Y412MC61, complete genome80.8946 %Subject → Query28.6055
NC_013411:284461Geobacillus sp. Y412MC61, complete genome80.8762 %Subject ←→ Query36.9212
NC_006510:1400000*Geobacillus kaustophilus HTA426, complete genome80.7384 %Subject ←→ Query38.8011
NC_014915:2387639Geobacillus sp. Y412MC52 chromosome, complete genome80.5637 %Subject ←→ Query32.928
NC_006322:4048990Bacillus licheniformis ATCC 14580, complete genome80.3891 %Subject ←→ Query32.0525
NC_014915:2963500Geobacillus sp. Y412MC52 chromosome, complete genome80.3309 %Subject ←→ Query36.3336
NC_014915:3259440Geobacillus sp. Y412MC52 chromosome, complete genome80.2696 %Subject ←→ Query36.3561
NC_013411:2951559Geobacillus sp. Y412MC61, complete genome80.2298 %Subject → Query26.0731
NC_013411:735838Geobacillus sp. Y412MC61, complete genome80.1961 %Subject ←→ Query34.1271
NC_013411:2191514*Geobacillus sp. Y412MC61, complete genome80.1899 %Subject → Query29.8119
NC_014915:1331459*Geobacillus sp. Y412MC52 chromosome, complete genome80.1808 %Subject → Query29.3197
NC_014915:2427000Geobacillus sp. Y412MC52 chromosome, complete genome80.1654 %Subject ←→ Query38.0805
NC_006510:2110430Geobacillus kaustophilus HTA426, complete genome79.9877 %Subject → Query29.4869
NC_012793:3243727Geobacillus sp. WCH70, complete genome79.5864 %Subject ←→ Query33.5494
NC_013411:334549Geobacillus sp. Y412MC61, complete genome79.3413 %Subject → Query31.2318
NC_006510:1921541Geobacillus kaustophilus HTA426, complete genome79.1851 %Subject → Query30.4934
NC_011026:1681852*Chloroherpeton thalassium ATCC 35110, complete genome79.1544 %Subject → Query27.3772
NC_006322:2886404*Bacillus licheniformis ATCC 14580, complete genome79.1176 %Subject → Query31.3686
NC_014915:1880748Geobacillus sp. Y412MC52 chromosome, complete genome79.0012 %Subject → Query30.9399
NC_013411:681907Geobacillus sp. Y412MC61, complete genome78.9614 %Subject → Query30.5897
NC_006510:1501487Geobacillus kaustophilus HTA426, complete genome78.7837 %Subject → Query31.1681
NC_013411:597235Geobacillus sp. Y412MC61, complete genome78.7561 %Subject ←→ Query35.813
NC_014915:727631*Geobacillus sp. Y412MC52 chromosome, complete genome78.75 %Subject → Query27.4562
NC_013411:1587689*Geobacillus sp. Y412MC61, complete genome78.606 %Subject → Query29.6612
NC_011026:2624775Chloroherpeton thalassium ATCC 35110, complete genome78.4804 %Subject → Query24.5683
NC_013411:1941762Geobacillus sp. Y412MC61, complete genome78.4743 %Subject ←→ Query35.4059
NC_013406:4000518Paenibacillus sp. Y412MC10 chromosome, complete genome78.4069 %Subject → Query31.2804
NC_006510:1901954Geobacillus kaustophilus HTA426, complete genome78.2996 %Subject → Query30.262
NC_013406:3400114Paenibacillus sp. Y412MC10 chromosome, complete genome78.2935 %Subject ←→ Query41.0068
NC_014915:1080793Geobacillus sp. Y412MC52 chromosome, complete genome78.1127 %Subject ←→ Query34.7963
NC_006510:1446490Geobacillus kaustophilus HTA426, complete genome78.0821 %Subject ←→ Query34.7114
NC_010337:803748Heliobacterium modesticaldum Ice1, complete genome77.8493 %Subject ←→ Query48.9344
NC_014915:1376035Geobacillus sp. Y412MC52 chromosome, complete genome77.7083 %Subject ←→ Query33.9451
NC_013411:2236166Geobacillus sp. Y412MC61, complete genome77.6685 %Subject ←→ Query34.9976
NC_014828:2038692Ethanoligenens harbinense YUAN-3 chromosome, complete genome77.5827 %Subject ←→ Query39.8666
NC_016023:1538000*Bacillus coagulans 36D1 chromosome, complete genome77.4632 %Subject → Query27.6447
NC_012796:4075583*Desulfovibrio magneticus RS-1, complete genome77.4357 %Subject ← Query56.2196
NC_006510:1995916Geobacillus kaustophilus HTA426, complete genome76.9945 %Subject → Query31.0693
NC_014915:2900209Geobacillus sp. Y412MC52 chromosome, complete genome76.9822 %Subject ←→ Query34.6121
NC_013406:5954472Paenibacillus sp. Y412MC10 chromosome, complete genome76.777 %Subject ←→ Query37.4529
NC_013406:3975512*Paenibacillus sp. Y412MC10 chromosome, complete genome76.6452 %Subject ←→ Query34.1926
NC_014551:442135Bacillus amyloliquefaciens DSM 7, complete genome76.3572 %Subject ←→ Query32.3231
NC_016023:1839503Bacillus coagulans 36D1 chromosome, complete genome76.2132 %Subject → Query27.7663
NC_013406:347995Paenibacillus sp. Y412MC10 chromosome, complete genome76.0938 %Subject ←→ Query34.3654
NC_013406:3650300Paenibacillus sp. Y412MC10 chromosome, complete genome76.0202 %Subject ←→ Query34.0613
NC_013037:6281164*Dyadobacter fermentans DSM 18053, complete genome75.9957 %Subject ←→ Query45.9244
NC_016026:1224129*Micavibrio aeruginosavorus ARL-13 chromosome, complete genome75.9559 %Subject ←→ Query47.9407
NC_009725:3447336Bacillus amyloliquefaciens FZB42, complete genome75.8241 %Subject ←→ Query35.2991
NC_011026:3044717*Chloroherpeton thalassium ATCC 35110, complete genome75.818 %Subject → Query27.627
NC_013037:2364514*Dyadobacter fermentans DSM 18053, complete genome75.7169 %Subject ←→ Query40.4342
NC_010337:2848360*Heliobacterium modesticaldum Ice1, complete genome75.6403 %Subject ←→ Query48.8605
NC_015690:3941113*Paenibacillus mucilaginosus KNP414 chromosome, complete genome75.3891 %Subject ←→ Query44.4181
NC_002570:1220180Bacillus halodurans C-125, complete genome75.2819 %Subject → Query30.258
NC_009725:3559257Bacillus amyloliquefaciens FZB42, complete genome75.2788 %Subject → Query29.9732
NC_015975:1936504*Lactobacillus ruminis ATCC 27782 chromosome, complete genome75.2267 %Subject ←→ Query33.1165