Pre_GI: OUP Neighbours

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Query: NC_004556:1132354 Xylella fastidiosa Temecula1, complete genome

D: 38.8649

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1998 from a naturally infected Californian, USA grapevine. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem. The cell produces an exopolysaccharide that is similar to the xanthan gum produced by Xanthomonas campestris pv. campestris.

Number of Neighbours: 5

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_012982:1282856Hirschia baltica ATCC 49814, complete genome76.008 %Subject Query27.7724
NC_002488:45219*Xylella fastidiosa 9a5c, complete genome75.3431 %Subject ←→ Query34.1567
NC_002488:2546495Xylella fastidiosa 9a5c, complete genome76.0386 %Subject ←→ Query34.3385
NC_004556:151593*Xylella fastidiosa Temecula1, complete genome76.6912 %Subject ←→ Query39.9027
NC_004556:1611973Xylella fastidiosa Temecula1, complete genome77.3407 %Subject ←→ Query42.9799