Pre_GI Gene

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Host: NC_004556 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_004556:1611973 Xylella fastidiosa Temecula1, complete genome

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated in 1998 from a naturally infected Californian, USA grapevine. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem. The cell produces an exopolysaccharide that is similar to the xanthan gum produced by Xanthomonas campestris pv. campestris.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
161197316135051533GumJ proteinQuickGO ontologyBLASTP
16135021613780279hypothetical proteinBLASTP
161388116150231143GumH proteinQuickGO ontologyBLASTP
161550016165701071GumF proteinQuickGO ontologyBLASTP
161658816178621275GumE proteinQuickGO ontologyBLASTP
161790816193621455GumD proteinQuickGO ontologyBLASTP
161957416209771404GumC proteinQuickGO ontologyBLASTP
16209801621633654GumB proteinQuickGO ontologyBLASTP
1622344162341710743-isopropylmalate dehydrogenaseQuickGO ontologyBLASTP
16240021624649648isopropylmalate isomerase small subunitQuickGO ontologyBLASTP
162486016262841425isopropylmalate isomerase large subunitQuickGO ontologyBLASTP
16278101628160351hypothetical proteinBLASTP
16288621629689828hypothetical proteinBLASTP
162987916311141236membrane fusion protein precursorQuickGO ontologyBLASTP