Pre_GI: OUP Neighbours

Some Help

Query: NC_020389:1936000 Methanosarcina mazei Tuc01, complete genome

D: 24.2127

Host Lineage: Methanosarcina mazei; Methanosarcina; Methanosarcinaceae; Methanosarcinales; Euryarchaeota; Archaea

General Information: This organism is a strictly anaerobic, non-motile, methane-producing archaeon. This organism can also aggregate forming large irregular shaped clumps of cells. Occasionally these aggregates can grow to 1000 microns or more in diameter. Growth occurs at pH 5.5-8.0, with optimum growth at pH 6.8-7.2. Growth occurs at pH 5.5-8.0, with optimum growth at pH 6.8-7.2. Can be found in decaying leaf litter, garden soil, sewage treatment sludge digestors, black mud, feces of herbivores and other urban waste and sewage products.

Number of Neighbours: 106




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Select all Donors or Recipients for Query Island



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_020389:3142924Methanosarcina mazei Tuc01, complete genome86.7096 %Subject ←→ Query22.7991
NC_020389:1083517*Methanosarcina mazei Tuc01, complete genome82.7911 %Subject ←→ Query22.942
NC_018645:3029785*Desulfobacula toluolica Tol2, complete genome76.0202 %Subject ←→ Query23.0575
NC_020389:2165590*Methanosarcina mazei Tuc01, complete genome81.6881 %Subject ←→ Query23.1852
NC_020389:1346358*Methanosarcina mazei Tuc01, complete genome84.4056 %Subject ←→ Query23.2551
NC_020304:3447847Desulfocapsa sulfexigens DSM 10523, complete genome76.921 %Subject ←→ Query24.088
NC_003901:1268995Methanosarcina mazei Go1, complete genome82.0466 %Subject ←→ Query24.3221
NC_020389:3106847Methanosarcina mazei Tuc01, complete genome78.0453 %Subject ←→ Query24.3821
NC_003901:1177056*Methanosarcina mazei Go1, complete genome82.4418 %Subject ←→ Query24.4832
NC_014002:1357393*Methanohalophilus mahii DSM 5219 chromosome, complete genome75.674 %Subject ←→ Query24.7902
NC_014002:1173561Methanohalophilus mahii DSM 5219 chromosome, complete genome75.2972 %Subject ←→ Query24.8176
NC_020389:714178Methanosarcina mazei Tuc01, complete genome83.2782 %Subject ←→ Query24.9559
NC_019977:2375703*Methanomethylovorans hollandica DSM 15978, complete genome75.3401 %Subject ←→ Query25.5897
NC_014002:1408085*Methanohalophilus mahii DSM 5219 chromosome, complete genome77.4387 %Subject ←→ Query25.6323
NC_019977:468568*Methanomethylovorans hollandica DSM 15978, complete genome76.9638 %Subject ←→ Query25.839
NC_019977:65205Methanomethylovorans hollandica DSM 15978, complete genome78.2751 %Subject ←→ Query26.3667
NC_014002:403180*Methanohalophilus mahii DSM 5219 chromosome, complete genome75.1011 %Subject ←→ Query26.4135
NC_007955:1464000*Methanococcoides burtonii DSM 6242, complete genome75.625 %Subject ←→ Query26.4895
NC_019977:302454Methanomethylovorans hollandica DSM 15978, complete genome80.2849 %Subject ←→ Query26.8999
NC_020389:1730376Methanosarcina mazei Tuc01, complete genome84.6385 %Subject ←→ Query26.9943
NC_007955:1498777*Methanococcoides burtonii DSM 6242, complete genome75.671 %Subject ←→ Query27.1006
NC_016633:2655811Sphaerochaeta pleomorpha str. Grapes chromosome, complete genome75.1685 %Subject ←→ Query27.4542
NC_020304:2237194Desulfocapsa sulfexigens DSM 10523, complete genome75.4197 %Subject ←→ Query27.4562
NC_003901:3750000Methanosarcina mazei Go1, complete genome87.2426 %Subject ←→ Query28.0581
NC_007955:1523500*Methanococcoides burtonii DSM 6242, complete genome76.3726 %Subject ←→ Query28.0731
NC_020389:2288541*Methanosarcina mazei Tuc01, complete genome80.6801 %Subject ←→ Query28.2446
NC_003901:2685716*Methanosarcina mazei Go1, complete genome81.0447 %Subject ←→ Query28.3975
NC_003901:3591500Methanosarcina mazei Go1, complete genome80.2328 %Subject ←→ Query29.0451
NC_020389:990000*Methanosarcina mazei Tuc01, complete genome83.6581 %Subject ←→ Query29.1457
NC_003901:2727361Methanosarcina mazei Go1, complete genome82.0374 %Subject ←→ Query29.3128
NC_003552:5402000Methanosarcina acetivorans C2A, complete genome78.0423 %Subject ←→ Query29.4257
NC_019977:828427*Methanomethylovorans hollandica DSM 15978, complete genome76.8536 %Subject ←→ Query30.2977
NC_019977:1353332Methanomethylovorans hollandica DSM 15978, complete genome78.2721 %Subject ←→ Query30.76
NC_014002:1772060Methanohalophilus mahii DSM 5219 chromosome, complete genome76.9393 %Subject ←→ Query30.7654
NC_003552:4054908*Methanosarcina acetivorans C2A, complete genome78.8756 %Subject ←→ Query30.8521
NC_018876:2628966*Methanolobus psychrophilus R15 chromosome, complete genome82.0435 %Subject ←→ Query31.1162
NC_003901:860242Methanosarcina mazei Go1, complete genome79.8039 %Subject ←→ Query31.1817
NC_016633:1898234Sphaerochaeta pleomorpha str. Grapes chromosome, complete genome75.8088 %Subject ←→ Query31.5021
NC_018876:703633Methanolobus psychrophilus R15 chromosome, complete genome78.0729 %Subject ←→ Query31.8971
NC_003552:4782635Methanosarcina acetivorans C2A, complete genome75.5607 %Subject ←→ Query32.5138
NC_019977:2141677Methanomethylovorans hollandica DSM 15978, complete genome79.3536 %Subject ←→ Query32.5437
NC_020389:2439067Methanosarcina mazei Tuc01, complete genome83.8879 %Subject ←→ Query32.5517
NC_003901:815389Methanosarcina mazei Go1, complete genome78.9553 %Subject ←→ Query32.7812
NC_003552:4686036Methanosarcina acetivorans C2A, complete genome77.0221 %Subject ←→ Query34.0494
NC_003552:1492500*Methanosarcina acetivorans C2A, complete genome80.2206 %Subject ←→ Query34.0752
NC_003552:1008475Methanosarcina acetivorans C2A, complete genome77.6317 %Subject ←→ Query34.1205
NC_000916:251000Methanothermobacter thermautotrophicus str. Delta H, complete76.9822 %Subject ← Query34.2198
NC_018876:1551155Methanolobus psychrophilus R15 chromosome, complete genome76.1857 %Subject ← Query34.6729
NC_003552:1202909Methanosarcina acetivorans C2A, complete genome79.1789 %Subject ← Query35.8329
NC_003552:3269000Methanosarcina acetivorans C2A, complete genome76.7065 %Subject ← Query36.9331
NC_003552:3092456Methanosarcina acetivorans C2A, complete genome78.4467 %Subject ← Query38.0267
NC_018876:1489895Methanolobus psychrophilus R15 chromosome, complete genome77.258 %Subject ← Query39.7637
NC_016633:1353458*Sphaerochaeta pleomorpha str. Grapes chromosome, complete genome76.8229 %Subject ← Query39.88