Pre_GI: OUP Neighbours

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Query: NC_006510:1400000 Geobacillus kaustophilus HTA426, complete genome

D: 38.8011

Host Lineage: Geobacillus kaustophilus; Geobacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Geobacillus kaustophilus strain HTA426 was first isolated from deep sea sediment of the Mariana Trench in the Pacific Ocean and belongs to a closely related group of thermophilic Bacillus spp. Members of this genus were originally classified as Bacillus. Recent rDNA analysis and DNA-DNA hybridization studies using spore-forming thermophilic subsurface isolates provided enough evidence to define the phylogenetically distinct, physiologically and morphologically consistent taxon Geobacillus. Geobacillus species are chemo-organotrophic, obligately thermophilic, motile, spore-forming, aerobic or facultatively anaerobic. This organism was compared with mesophilic Bacillus spp. to identify genome characteristics and specific genes related to thermophilia. Analysis of the amino acid compositions showed clear differences between Geobacillus kaustophilus and the mesophilic bacilli. In addition, the higher G+C content in Geobacillus kaustophilus rRNA also appears correlated to thermophilia. In addition, tRNA modification by the Geobacillus kaustophilus specific tRNA methyltransferases probably aids in the thermoadaptation of this organism.

Number of Neighbours: 72




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_013411:2951559Geobacillus sp. Y412MC61, complete genome83.0821 %Subject → Query26.0731
NC_012793:3035978Geobacillus sp. WCH70, complete genome76.9179 %Subject → Query27.2556
NC_014915:727631*Geobacillus sp. Y412MC52 chromosome, complete genome75.1501 %Subject → Query27.4562
NC_016023:1538000*Bacillus coagulans 36D1 chromosome, complete genome77.7053 %Subject → Query27.6447
NC_016023:1839503Bacillus coagulans 36D1 chromosome, complete genome77.644 %Subject → Query27.7663
NC_013411:2739989Geobacillus sp. Y412MC61, complete genome84.2984 %Subject → Query28.6055
NC_014915:1331459*Geobacillus sp. Y412MC52 chromosome, complete genome83.3517 %Subject ←→ Query29.3197
NC_006510:2110430Geobacillus kaustophilus HTA426, complete genome83.6305 %Subject ←→ Query29.4869
NC_013411:1587689*Geobacillus sp. Y412MC61, complete genome75.2267 %Subject ←→ Query29.6612
NC_013406:4023367Paenibacillus sp. Y412MC10 chromosome, complete genome78.5539 %Subject ←→ Query29.6966
NC_006510:746814Geobacillus kaustophilus HTA426, complete genome77.9933 %Subject ←→ Query29.7149
NC_013411:2191514*Geobacillus sp. Y412MC61, complete genome83.3425 %Subject ←→ Query29.8119
NC_011567:2556915*Anoxybacillus flavithermus WK1, complete genome75.4779 %Subject ←→ Query30.2456
NC_002570:1220180Bacillus halodurans C-125, complete genome76.7188 %Subject ←→ Query30.258
NC_006510:1901954Geobacillus kaustophilus HTA426, complete genome79.663 %Subject ←→ Query30.262
NC_014915:308056*Geobacillus sp. Y412MC52 chromosome, complete genome80.5699 %Subject ←→ Query30.3414
NC_006510:1921541Geobacillus kaustophilus HTA426, complete genome84.7763 %Subject ←→ Query30.4934
NC_013411:1168049*Geobacillus sp. Y412MC61, complete genome80.5699 %Subject ←→ Query30.6232
NC_006510:795973Geobacillus kaustophilus HTA426, complete genome77.1599 %Subject ←→ Query30.7393
NC_014915:1880748Geobacillus sp. Y412MC52 chromosome, complete genome84.2126 %Subject ←→ Query30.9399
NC_006510:1995916Geobacillus kaustophilus HTA426, complete genome82.3958 %Subject ←→ Query31.0693
NC_006510:1501487Geobacillus kaustophilus HTA426, complete genome84.4118 %Subject ←→ Query31.1681
NC_012914:1824955Paenibacillus sp. JDR-2, complete genome76.8107 %Subject ←→ Query31.1862
NC_013411:334549Geobacillus sp. Y412MC61, complete genome79.2157 %Subject ←→ Query31.2318
NC_013406:4000518Paenibacillus sp. Y412MC10 chromosome, complete genome77.3805 %Subject ←→ Query31.2804
NC_006322:2886404*Bacillus licheniformis ATCC 14580, complete genome78.03 %Subject ←→ Query31.3686
NC_002570:3911153*Bacillus halodurans C-125, complete genome78.4283 %Subject ←→ Query31.5792
NC_006510:2778777Geobacillus kaustophilus HTA426, complete genome81.1152 %Subject ←→ Query31.9066
NC_006322:4048990Bacillus licheniformis ATCC 14580, complete genome79.5833 %Subject ←→ Query32.0525
NC_015975:441580*Lactobacillus ruminis ATCC 27782 chromosome, complete genome76.5839 %Subject ←→ Query32.2212
NC_013406:7092510*Paenibacillus sp. Y412MC10 chromosome, complete genome75.0735 %Subject ←→ Query32.5359
NC_013411:2767400Geobacillus sp. Y412MC61, complete genome85.3646 %Subject ←→ Query32.8925
NC_014915:2387639Geobacillus sp. Y412MC52 chromosome, complete genome81.0141 %Subject ←→ Query32.928
NC_006510:372826*Geobacillus kaustophilus HTA426, complete genome84.4118 %Subject ←→ Query33.0492
NC_012491:3115518Brevibacillus brevis NBRC 100599, complete genome76.3358 %Subject ←→ Query33.0572
NC_002570:2616899*Bacillus halodurans C-125, complete genome77.5827 %Subject ←→ Query33.1059
NC_015975:1936504*Lactobacillus ruminis ATCC 27782 chromosome, complete genome76.6697 %Subject ←→ Query33.1165
NC_014219:2976642*Bacillus selenitireducens MLS10 chromosome, complete genome75.3554 %Subject ←→ Query33.5231
NC_012793:3243727Geobacillus sp. WCH70, complete genome78.7623 %Subject ←→ Query33.5494
NC_014915:2092678Geobacillus sp. Y412MC52 chromosome, complete genome85.9498 %Subject ←→ Query33.7161
NC_014915:1376035Geobacillus sp. Y412MC52 chromosome, complete genome79.9663 %Subject ←→ Query33.9451
NC_015572:1Methylomonas methanica MC09 chromosome, complete genome76.0018 %Subject ←→ Query34.0009
NC_013406:3874157Paenibacillus sp. Y412MC10 chromosome, complete genome77.4418 %Subject ←→ Query34.0467
NC_013406:3650300Paenibacillus sp. Y412MC10 chromosome, complete genome79.277 %Subject ←→ Query34.0613
NC_013411:735838Geobacillus sp. Y412MC61, complete genome79.4638 %Subject ←→ Query34.1271
NC_006510:1446490Geobacillus kaustophilus HTA426, complete genome79.6661 %Subject ←→ Query34.7114
NC_014915:1080793Geobacillus sp. Y412MC52 chromosome, complete genome75.5423 %Subject ←→ Query34.7963
NC_013411:2236166Geobacillus sp. Y412MC61, complete genome79.7304 %Subject ←→ Query34.9976
NC_012914:4238142Paenibacillus sp. JDR-2, complete genome75.7782 %Subject ←→ Query35.0494
NC_014915:332784Geobacillus sp. Y412MC52 chromosome, complete genome79.0931 %Subject ←→ Query35.3478
NC_013411:1941762Geobacillus sp. Y412MC61, complete genome75.9589 %Subject ←→ Query35.4059
NC_013411:597235Geobacillus sp. Y412MC61, complete genome83.8695 %Subject ←→ Query35.813
NC_013411:2975364Geobacillus sp. Y412MC61, complete genome83.799 %Subject ←→ Query35.9085
NC_014915:1909275Geobacillus sp. Y412MC52 chromosome, complete genome85.6403 %Subject ←→ Query36.0595
NC_014915:2963500Geobacillus sp. Y412MC52 chromosome, complete genome84.4945 %Subject ←→ Query36.3336
NC_014915:3259440Geobacillus sp. Y412MC52 chromosome, complete genome86.0018 %Subject ←→ Query36.3561
NC_016023:1083826Bacillus coagulans 36D1 chromosome, complete genome76.7371 %Subject ←→ Query36.5698
NC_006510:2044347Geobacillus kaustophilus HTA426, complete genome83.1373 %Subject ←→ Query36.7248
NC_013411:284461Geobacillus sp. Y412MC61, complete genome85.7935 %Subject ←→ Query36.9212
NC_011830:693555*Desulfitobacterium hafniense DCB-2, complete genome75.2114 %Subject ←→ Query36.9703
NC_006510:310212*Geobacillus kaustophilus HTA426, complete genome82.8339 %Subject ←→ Query37.0244
NC_002570:2649759*Bacillus halodurans C-125, complete genome76.6912 %Subject ←→ Query37.3257
NC_014915:2427000Geobacillus sp. Y412MC52 chromosome, complete genome84.6293 %Subject ←→ Query38.0805
NC_006510:1014500*Geobacillus kaustophilus HTA426, complete genome83.7102 %Subject ←→ Query39.7198
NC_013411:1454465Geobacillus sp. Y412MC61, complete genome78.3119 %Subject ←→ Query39.8118
NC_014828:2038692Ethanoligenens harbinense YUAN-3 chromosome, complete genome75.0858 %Subject ←→ Query39.8666
NC_015690:4361000Paenibacillus mucilaginosus KNP414 chromosome, complete genome76.6851 %Subject ←→ Query40.7943
NC_013406:3400114Paenibacillus sp. Y412MC10 chromosome, complete genome75.6801 %Subject ←→ Query41.0068
NC_014915:595569Geobacillus sp. Y412MC52 chromosome, complete genome78.3395 %Subject ←→ Query41.0221
NC_006510:1731939*Geobacillus kaustophilus HTA426, complete genome80.7384 %Subject ←→ Query41.4725
NC_015690:3941113*Paenibacillus mucilaginosus KNP414 chromosome, complete genome75.8149 %Subject ←→ Query44.4181
NC_010337:803748Heliobacterium modesticaldum Ice1, complete genome78.5815 %Subject ← Query48.9344