Pre_GI Island

Some Help

n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




NC_020054: Fibrella aestuarina BUZ 2 drat genome

NCBI: NC_020054

Host Lineage: Fibrella aestuarina; Fibrella; Cytophagaceae; Cytophagales; Bacteroidetes; Bacteria

General Information: The organism was isolated from coastal mud from the North Sea (Fedderwardersiel, Germany). Filamentous marine bacterium.



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

#StartEndLengthIsland TextGRV_RVDPSNeighboursClusterSub ClusterBLASTNKey Word ConfirmationOther DB ConfirmationDownload Island
146541348531019898Island text1.4826730.514342.295BLASTN+465413.gbk
2587300*61144124142Island text1.6867630.252939.9356BLASTN587300.gbk
376551178867723167Island text1.5745532.982728.8038765511.gbk
4943945*96979925855Island text2.2979839.5228.9861BLASTN+943945.gbk
51002906103131828413Island text2.8427243.912230.0474BLASTN+1002906.gbk
61335699*135810022402Island text1.7537335.304648.8038BLASTN1335699.gbk
71666263*169726331001Island text4.5767753.82824.504BLASTN+1666263.gbk
82033982205656422583Island text1.8064730.699852.9541Neighbours11BLASTN2033982.gbk
92066510*209622529716Island text3.2137248.230829.8362BLASTN+2066510.gbk
102147857*217470426848Island text2.1633742.612324.5219BLASTN+2147857.gbk
112260500229044329944Island text1.7262238.71644.0278BLASTN+2260500.gbk
122679676270224122566Island text1.6758533.646929.9336BLASTN+2679676.gbk
132801371282196720597Island text1.5130429.790921.5008BLASTN+2801371.gbk
143132478315676324286Island text2.1000337.76131.3544BLASTN3132478.gbk
153501467*352075219286Island text1.6287830.138926.5136BLASTN3501467.gbk
163929181*395097021790Island text1.6268728.805923.5504BLASTN3929181.gbk
174028444*405509726654Island text1.7162431.551238.6827BLASTN4028444.gbk
184161049*419960538557Island text4.5355151.325135.9362BLASTN+4161049.gbk
194550000457125421255Island text1.9235735.563629.49584550000.gbk
204625895*466399338099Island text2.6158946.825831.3252Neighbours39BLASTN+4625895.gbk
214795000*481909924100Island text2.013937.508735.7917BLASTN+4795000.gbk
224848000492609978100Island text2.1205937.465728.4336Neighbours46BLASTN+4848000.gbk
234933725*496534631622Island text1.6025629.312830.0027BLASTN+4933725.gbk
244983691*500859924909Island text2.3589640.411828.4126BLASTN4983691.gbk
255023996*504861124616Island text1.7861335.777626.127BLASTN5023996.gbk
266111419614996938551Island text6.8381156.505223.3983Neighbours39BLASTN6111419.gbk
276162836618147818643Island text1.5975529.545630.159BLASTN+6162836.gbk
286259733*628219722465Island text1.9184228.571948.0022BLASTN6259733.gbk