Pre_GI: SEQWORD Parameters

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n1_4mer:GRV/n1_4mer:RV = (Global Relative Variance of OU patterns) / (Local Relative Variance of OU patterns)

n0_4mer:D = Distance between local and global OU patterns

n0_4mer:PS = Distance between 2 strands of same DNA molecule

Selected loci indicated by large D, increased GRV associated with decreased RV and moderate increase in PS




Query: NC_020054:1666263 Fibrella aestuarina BUZ 2 drat genome

Host Lineage: Fibrella aestuarina; Fibrella; Cytophagaceae; Cytophagales; Bacteroidetes; Bacteria

General Information: The organism was isolated from coastal mud from the North Sea (Fedderwardersiel, Germany). Filamentous marine bacterium.



Query D = 53.828

Lower LimitUpper Limit



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

IslandHost DescriptionDNeighboursBLASTN
NC_010337:2848360*Heliobacterium modesticaldum Ice1, complete genome48.8605NeighboursBLASTN
NC_013406:6494079Paenibacillus sp. Y412MC10 chromosome, complete genome48.8846NeighboursBLASTN
NC_015968:511282*Enterobacter asburiae LF7a chromosome, complete genome48.9219NeighboursBLASTN
NC_010337:803748Heliobacterium modesticaldum Ice1, complete genome48.9344NeighboursBLASTN
NC_007645:5397526Hahella chejuensis KCTC 2396, complete genome49.0258NeighboursBLASTN
NC_009436:3367194*Enterobacter sp. 638, complete genome49.0473NeighboursBLASTN
NC_015865:1260461*Thermococcus sp. 4557 chromosome, complete genome49.0487NeighboursBLASTN
NC_008781:4178115*Polaromonas naphthalenivorans CJ2, complete genome49.0709NeighboursBLASTN
NC_015873:924392Megasphaera elsdenii DSM 20460, complete genome49.076NeighboursBLASTN
NC_014306:4106569*Erwinia billingiae Eb661, complete genome49.1199NeighboursBLASTN
NC_013716:1298932Citrobacter rodentium ICC168, complete genome49.2638NeighboursBLASTN
NC_006856:95830Salmonella enterica subsp. enterica serovar Choleraesuis str49.3906NeighboursBLASTN
NC_015501:1941851*Porphyromonas asaccharolytica DSM 20707 chromosome, complete49.4604NeighboursBLASTN
NC_009092:179226*Shewanella loihica PV-4, complete genome49.4822NeighboursBLASTN
NC_014618:1103239Enterobacter cloacae SCF1 chromosome, complete genome49.4906NeighboursBLASTN
NC_013173:133466Desulfomicrobium baculatum DSM 4028, complete genome49.5268NeighboursBLASTN
NC_008570:3220539*Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome49.5623NeighboursBLASTN
NC_011283:1901229*Klebsiella pneumoniae 342 chromosome, complete genome49.5744NeighboursBLASTN
NC_013716:2255102Citrobacter rodentium ICC168, complete genome49.6125NeighboursBLASTN
NC_009648:1487692Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome49.6231NeighboursBLASTN
NC_009464:931647Uncultured methanogenic archaeon RC-I, complete genome49.6416NeighboursBLASTN
NC_020064:3998715*Serratia marcescens FGI94, complete genome49.6448NeighboursBLASTN
NC_014828:637523Ethanoligenens harbinense YUAN-3 chromosome, complete genome49.7096NeighboursBLASTN
NC_013222:817686*Robiginitalea biformata HTCC2501, complete genome49.7242NeighboursBLASTN
NC_014618:4657719Enterobacter cloacae SCF1 chromosome, complete genome49.7421NeighboursBLASTN
NC_008609:1027838Pelobacter propionicus DSM 2379, complete genome49.7644NeighboursBLASTN
NC_013850:4829455*Klebsiella variicola At-22 chromosome, complete genome49.7834NeighboursBLASTN
NC_010337:98974*Heliobacterium modesticaldum Ice1, complete genome49.7889NeighboursBLASTN
NC_009464:650997*Uncultured methanogenic archaeon RC-I, complete genome49.8286NeighboursBLASTN
NC_016816:1912366*Pantoea ananatis LMG 5342, complete genome49.9044NeighboursBLASTN
NC_008700:2701500*Shewanella amazonensis SB2B, complete genome49.9286NeighboursBLASTN
NC_010655:373437Akkermansia muciniphila ATCC BAA-835, complete genome49.9389NeighboursBLASTN
NC_013173:1356526*Desulfomicrobium baculatum DSM 4028, complete genome49.9427NeighboursBLASTN
NC_018691:1822731Alcanivorax dieselolei B5 chromosome, complete genome49.9461NeighboursBLASTN
NC_007516:193498*Synechococcus sp. CC9605, complete genome50.0753NeighboursBLASTN
NC_013406:2866000*Paenibacillus sp. Y412MC10 chromosome, complete genome50.1139NeighboursBLASTN
NC_011831:1610346Chloroflexus aggregans DSM 9485, complete genome50.1181
NC_013665:1123943Methanocella paludicola SANAE, complete genome50.1455NeighboursBLASTN
NC_010337:2793667*Heliobacterium modesticaldum Ice1, complete genome50.1502NeighboursBLASTN
NC_008609:3921113Pelobacter propionicus DSM 2379, complete genome50.2149NeighboursBLASTN
NC_015061:1902251Rahnella sp. Y9602 chromosome, complete genome50.2801NeighboursBLASTN
NC_009973:77518Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, complete50.353Neighbours
NC_008609:3672653Pelobacter propionicus DSM 2379, complete genome50.3622NeighboursBLASTN
NC_019968:1387352Prevotella dentalis DSM 3688 chromosome 2, complete sequence50.3903BLASTN
NC_013173:953633*Desulfomicrobium baculatum DSM 4028, complete genome50.4175NeighboursBLASTN
NC_013508:1491945*Edwardsiella tarda EIB202, complete genome50.42NeighboursBLASTN
NC_007516:1618033Synechococcus sp. CC9605, complete genome50.4569NeighboursBLASTN
NC_011832:366092Candidatus Methanosphaerula palustris E1-9c, complete genome50.4803NeighboursBLASTN
NC_019960:1126000Prevotella dentalis DSM 3688 chromosome 1, complete sequence50.4959BLASTN
NC_007516:2277910*Synechococcus sp. CC9605, complete genome50.5095NeighboursBLASTN
NC_018515:1354511Desulfosporosinus meridiei DSM 13257 chromosome, complete genome50.5135NeighboursBLASTN
NC_009092:1599526Shewanella loihica PV-4, complete genome50.5468NeighboursBLASTN
NC_021066:3703725*Raoultella ornithinolytica B6, complete genome50.563NeighboursBLASTN
NC_019960:1658657*Prevotella dentalis DSM 3688 chromosome 1, complete sequence50.6039BLASTN
NC_002932:1798869*Chlorobium tepidum TLS, complete genome50.6144NeighboursBLASTN
NC_014121:1589389*Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete50.627NeighboursBLASTN
NC_008609:2643000Pelobacter propionicus DSM 2379, complete genome50.679NeighboursBLASTN
NC_010501:908000Pseudomonas putida W619, complete genome50.7357NeighboursBLASTN
NC_014618:690056*Enterobacter cloacae SCF1 chromosome, complete genome50.7621NeighboursBLASTN
NC_009648:2465613*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome50.7802NeighboursBLASTN
NC_013282:2827757Cronobacter turicensis, complete genome50.8159NeighboursBLASTN
NC_019960:1524338Prevotella dentalis DSM 3688 chromosome 1, complete sequence50.8352BLASTN
NC_005070:617448Synechococcus sp. WH 8102, complete genome50.8478NeighboursBLASTN
NC_014643:1251847*Rothia dentocariosa ATCC 17931 chromosome, complete genome50.8673BLASTN
NC_008609:3119502Pelobacter propionicus DSM 2379, complete genome50.8728NeighboursBLASTN
NC_009481:82767Synechococcus sp. WH 7803 chromosome, complete genome50.978NeighboursBLASTN
NC_015690:6521740*Paenibacillus mucilaginosus KNP414 chromosome, complete genome51.0614NeighboursBLASTN
NC_013592:4511478Dickeya dadantii Ech586, complete genome51.0662NeighboursBLASTN
NC_019968:891904Prevotella dentalis DSM 3688 chromosome 2, complete sequence51.1746BLASTN
NC_016818:2927500Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, complete51.222NeighboursBLASTN
NC_016935:2503071*Paenibacillus mucilaginosus 3016 chromosome, complete genome51.3051NeighboursBLASTN
NC_020054:4161049*Fibrella aestuarina BUZ 2 drat genome51.3251BLASTN
NC_003228:2010643Bacteroides fragilis NCTC 9343, complete genome51.3542NeighboursBLASTN
NC_014541:1165991Ferrimonas balearica DSM 9799 chromosome, complete genome51.4043NeighboursBLASTN
NC_019968:1147409*Prevotella dentalis DSM 3688 chromosome 2, complete sequence51.4094NeighboursBLASTN
NC_016885:2294000*Pyrobaculum oguniense TE7 chromosome, complete genome51.4358NeighboursBLASTN
NC_016051:1681076*Thermococcus sp. AM4 chromosome, complete genome51.499NeighboursBLASTN
NC_012912:3853377*Dickeya zeae Ech1591, complete genome51.5692NeighboursBLASTN
NC_015690:6595395Paenibacillus mucilaginosus KNP414 chromosome, complete genome51.6249NeighboursBLASTN
NC_017047:4037674Rahnella aquatilis HX2 chromosome, complete genome51.6377NeighboursBLASTN
NC_008570:4594436*Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome51.6501NeighboursBLASTN
NC_015690:7785875Paenibacillus mucilaginosus KNP414 chromosome, complete genome51.7482NeighboursBLASTN
NC_009792:3665369Citrobacter koseri ATCC BAA-895, complete genome51.8195NeighboursBLASTN
NC_009464:2523092Uncultured methanogenic archaeon RC-I, complete genome51.8602NeighboursBLASTN
NC_016051:1803880*Thermococcus sp. AM4 chromosome, complete genome51.9758NeighboursBLASTN
NC_014618:2139639*Enterobacter cloacae SCF1 chromosome, complete genome52.1392NeighboursBLASTN
NC_012796:3267569*Desulfovibrio magneticus RS-1, complete genome52.6121NeighboursBLASTN
NC_015963:117178Enterobacter asburiae LF7a plasmid pENTAS01, complete sequence52.6759NeighboursBLASTN
NC_015501:1762450Porphyromonas asaccharolytica DSM 20707 chromosome, complete52.7445NeighboursBLASTN
NC_012796:2757500Desulfovibrio magneticus RS-1, complete genome52.8173Neighbours
NC_014935:1704816Nitratifractor saLSUginis DSM 16511 chromosome, complete genome52.884NeighboursBLASTN
NC_019960:1198067*Prevotella dentalis DSM 3688 chromosome 1, complete sequence52.9228BLASTN
NC_015424:1689500Aeromonas veronii B565 chromosome, complete genome53.0358NeighboursBLASTN
NC_009348:1475955Aeromonas salmonicida subsp. salmonicida A449, complete genome53.1411NeighboursBLASTN
NC_009483:2086021Geobacter uraniireducens Rf4 chromosome, complete genome53.1981NeighboursBLASTN
NC_019968:382991*Prevotella dentalis DSM 3688 chromosome 2, complete sequence53.2135NeighboursBLASTN
NC_010410:3606826Acinetobacter baumannii AYE, complete genome53.266NeighboursBLASTN
NC_020211:2206500Serratia marcescens WW4, complete genome53.4692NeighboursBLASTN
NC_012796:1645856*Desulfovibrio magneticus RS-1, complete genome53.6076NeighboursBLASTN
NC_017098:1542284*Spirochaeta africana DSM 8902 chromosome, complete genome53.6594NeighboursBLASTN
NC_016816:3333000Pantoea ananatis LMG 5342, complete genome53.7123NeighboursBLASTN
NC_011283:4966471Klebsiella pneumoniae 342 chromosome, complete genome53.735NeighboursBLASTN
NC_013665:2132000Methanocella paludicola SANAE, complete genome53.7697NeighboursBLASTN
NC_009464:379377Uncultured methanogenic archaeon RC-I, complete genome53.8095NeighboursBLASTN
NC_020054:1666263*Fibrella aestuarina BUZ 2 drat genome53.828BLASTN
NC_013850:1658010Klebsiella variicola At-22 chromosome, complete genome53.863NeighboursBLASTN
NC_009838:81913*Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequence53.9447NeighboursBLASTN
NC_019968:8397*Prevotella dentalis DSM 3688 chromosome 2, complete sequence53.9678BLASTN
NC_008609:3732192*Pelobacter propionicus DSM 2379, complete genome54.0876NeighboursBLASTN
NC_019897:2908971*Thermobacillus composti KWC4 chromosome, complete genome54.139NeighboursBLASTN
NC_012918:3203136Geobacter sp. M21 chromosome, complete genome54.1503NeighboursBLASTN
NC_015315:1Thermoproteus uzoniensis 768-20 chromosome, complete genome54.1852NeighboursBLASTN
NC_007951:570500*Burkholderia xenovorans LB400 chromosome 1, complete sequence54.2081NeighboursBLASTN
NC_012880:3421500*Dickeya dadantii Ech703, complete genome54.2571NeighboursBLASTN
NC_012660:1804610*Pseudomonas fluorescens SBW25 chromosome, complete genome54.2743NeighboursBLASTN
NC_007517:1468719*Geobacter metallireducens GS-15, complete genome54.2759NeighboursBLASTN
NC_017047:3174588Rahnella aquatilis HX2 chromosome, complete genome54.3115NeighboursBLASTN
NC_016645:1677703Pyrobaculum sp. 1860 chromosome, complete genome54.3781BLASTN
NC_019968:1235500Prevotella dentalis DSM 3688 chromosome 2, complete sequence54.3913NeighboursBLASTN
NC_009464:1479174Uncultured methanogenic archaeon RC-I, complete genome54.4617NeighboursBLASTN
NC_007516:124486*Synechococcus sp. CC9605, complete genome54.9261NeighboursBLASTN
NC_013665:1766158*Methanocella paludicola SANAE, complete genome54.9745NeighboursBLASTN
NC_019968:552440Prevotella dentalis DSM 3688 chromosome 2, complete sequence55.1362BLASTN
NC_007516:774489*Synechococcus sp. CC9605, complete genome55.3327NeighboursBLASTN
NC_009464:2687445Uncultured methanogenic archaeon RC-I, complete genome55.4602NeighboursBLASTN
NC_012796:77071*Desulfovibrio magneticus RS-1, complete genome55.8173NeighboursBLASTN
NC_016885:1784000Pyrobaculum oguniense TE7 chromosome, complete genome55.8536BLASTN
NC_012969:2136243*Methylovorus glucosetrophus SIP3-4 chromosome, complete genome56.0629NeighboursBLASTN
NC_012796:4075583*Desulfovibrio magneticus RS-1, complete genome56.2196NeighboursBLASTN
NC_014562:2563466*Pantoea vagans C9-1 chromosome, complete genome56.2301NeighboursBLASTN
NC_019968:1084288*Prevotella dentalis DSM 3688 chromosome 2, complete sequence56.3063NeighboursBLASTN
NC_020054:6111419Fibrella aestuarina BUZ 2 drat genome56.5052NeighboursBLASTN
NC_012918:1814000*Geobacter sp. M21 chromosome, complete genome56.5214NeighboursBLASTN
NC_013665:1922000Methanocella paludicola SANAE, complete genome56.7527NeighboursBLASTN
NC_005070:904751*Synechococcus sp. WH 8102, complete genome57.149BLASTN
NC_019968:175480*Prevotella dentalis DSM 3688 chromosome 2, complete sequence57.3734BLASTN
NC_011365:592256*Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome57.3988BLASTN
NC_005070:2374850*Synechococcus sp. WH 8102, complete genome57.4346NeighboursBLASTN
NC_016935:1365463*Paenibacillus mucilaginosus 3016 chromosome, complete genome58.1217NeighboursBLASTN
NC_010506:602000Shewanella woodyi ATCC 51908, complete genome58.2077
NC_007513:75197*Synechococcus sp. CC9902, complete genome58.3342NeighboursBLASTN
NC_012796:1049034*Desulfovibrio magneticus RS-1, complete genome58.3343NeighboursBLASTN
NC_019968:1304450*Prevotella dentalis DSM 3688 chromosome 2, complete sequence58.5325NeighboursBLASTN
NC_009778:2227627*Enterobacter sakazakii ATCC BAA-894, complete genome58.5615BLASTN