Pre_GI Gene

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Host: NC_016445 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016445:1027143 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
1027143104074413602RTX toxin RtxAQuickGO ontologyBLASTP
10412381041612375cholera enterotoxin subunit BQuickGO ontologyBLASTP
10416091042466858cholera enterotoxin A subunitQuickGO ontologyBLASTP
104249110436901200zona occludens toxinQuickGO ontologyBLASTP
10436871043980294accessory cholera enterotoxinQuickGO ontologyBLASTP
104397710452601284hypothetical proteinBLASTP
10452711045519249colonization factorQuickGO ontologyBLASTP
10455121045655144hypothetical proteinBLASTP
10456551046011357RstB phage-related integraseQuickGO ontologyBLASTP
104601310470921080RstA1 proteinQuickGO ontologyBLASTP
10472181047556339transcriptional repressor RstRQuickGO ontologyBLASTP
10478971048049153hypothetical proteinBLASTP
10480681048292225RstC proteinQuickGO ontologyBLASTP
10483861048736351RstB1 proteinQuickGO ontologyBLASTP
104873810498171080RstA1 proteinQuickGO ontologyBLASTP
10499431050281339transcriptional repressor RstRQuickGO ontologyBLASTP
10506221050774153hypothetical proteinBLASTP
10507711051355585hypothetical proteinBLASTP
10513481051515168hypothetical proteinBLASTP
10515931052285693hypothetical proteinBLASTP
10524151052699285hypothetical proteinBLASTP
105270410542691566phage replication protein CriQuickGO ontologyBLASTP
10544311054997567TlcR proteinQuickGO ontologyBLASTP
10553421055659318transposase OrfAB subunit AQuickGO ontologyBLASTP
10556561056528873transposase OrfAB subunit BQuickGO ontologyBLASTP
105669010579011212transposase mutator family proteinQuickGO ontologyBLASTP