Pre_GI: BLASTP Hits

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Query: NC_016445:1027143:1049943 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 1049943, End: 1050281, Length: 339

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:1547176:156996915699691570307339Vibrio cholerae IEC224 chromosome I, complete sequencetranscriptional repressor RstR3e-59226
NC_016944:1547176:156305615630561563394339Vibrio cholerae IEC224 chromosome I, complete sequencetranscriptional repressor RstR3e-59226
NC_016445:1027143:104721810472181047556339Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetranscriptional repressor RstR3e-59226
NC_002505:1550108:157294315729431573281339Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional repressor RstR3e-59226
NC_002505:1550108:156602715660271566365339Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional repressor RstR3e-59226
NC_005126:1265071:130947513094751309813339Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-1476.6
NC_005126:4333767:435394543539454354283339Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-1476.6
NC_005126:1613818:162726016272601627598339Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-1476.6
NC_005126:4333767:434657743465774346915339Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-1476.6
NC_014228:2883500:289160828916082891979372Xenorhabdus nematophila ATCC 19061, complete genomeputative Cryptic phage CTXphi transcriptional repressor rstR5e-1476.3
NC_014228:2883500:289875728987572899128372Xenorhabdus nematophila ATCC 19061, complete genomeputative Cryptic phage CTXphi transcriptional repressor rstR5e-1476.3
NC_008149:4053363:406410640641064064513408Yersinia pestis Nepal516, complete genometranscriptional regulatory protein2e-1064.7
NC_003143:4006884:402561340256134026020408Yersinia pestis CO92, complete genomeputative transcriptional regulatory protein2e-1064.7
NC_006155:4302826:430538543053854305792408Yersinia pseudotuberculosis IP 32953, complete genomeputative transcriptional regulatory protein2e-1064.7
NC_009381:222735:241443241443241850408Yersinia pestis Pestoides F chromosome, complete genometranscriptional regulatory protein2e-1064.7
NC_014029:3958811:397754039775403977947408Yersinia pestis Z176003 chromosome, complete genomeputative transcriptional regulatory protein2e-1064.7
NC_017154:3898925:391765439176543918061408Yersinia pestis D106004 chromosome, complete genometranscriptional regulator2e-1064.7
NC_017160:4073611:408435440843544084761408Yersinia pestis D182038 chromosome, complete genometranscriptional regulator2e-1064.7
NC_017168:1631052:164978116497811650188408Yersinia pestis A1122 chromosome, complete genomeputative transcriptional regulator2e-1064.7
NC_017265:4265659:426821842682184268625408Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transcriptional regulator2e-1064.7
NC_005810:4469156:448001144800114480499489Yersinia pestis biovar Microtus str. 91001, complete genomeputative transcriptional regulatory protein1e-1064.7
NC_004088:266543:277204277204277692489Yersinia pestis KIM, complete genometranscriptional repressor1e-1064.7
NC_012962:1068102:108946510894651089866402Photorhabdus asymbiotica, complete genomeputative phage regulator2e-1064.3
NC_012962:1068102:109723810972381097639402Photorhabdus asymbiotica, complete genomeputative phage regulator2e-1064.3
NC_016510:2312481:232574323257432326075333Flavobacterium columnare ATCC 49512 chromosome, complete genomehelix-turN-helix domain protein7e-0959.3
NC_010465:1790739:180572318057231806124402Yersinia pseudotuberculosis YPIII, complete genometranscriptional regulator, XRE family2e-0858.2
NC_021175:2063611:207187220718722072216345Streptococcus oligofermentans AS 1.3089, complete genomeCro/CI family transcriptional regulator3e-0857.4
NC_017025:1651870:166594816659481666286339Flavobacterium indicum GPTSA100-9, complete genometranscriptional regulator, XRE family6e-0856.2
NC_004129:195347:205065205065205427363Pseudomonas fluorescens Pf-5, complete genomeDNA-binding protein, putative1e-0755.5
NC_014657:2127500:214037221403722140905534Caldicellulosiruptor owensensis OL chromosome, complete genomehelix-turn-helix domain protein2e-0754.3
NC_015732:982774:9996799996791000284606Spirochaeta caldaria DSM 7334 chromosome, complete genomehelix-turn-helix domain-containing protein9e-0752.4
NC_012583:683887:702423702423702758336Vibrio cholerae O395 chromosome chromosome II, complete sequencecryptic phage CTXphi transcriptional repressor RstR, classical1e-0651.6
NC_009456:557962:561184561184561519336Vibrio cholerae O395 chromosome 1, complete sequencecryptic phage CTXphi transcriptional repressor RstR1e-0651.6
NC_012667:839318:858206858206858550345Vibrio cholerae MJ-1236 chromosome 2, complete genomecryptic phage CTXphi transcriptional repressor RstR1e-0651.6
NC_015573:2463123:248662424866242486842219Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0651.2
NC_005126:4333767:436409043640904364452363Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-0650.8
NC_005126:4333767:437298043729804373342363Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-0650.8
NC_015958:2174731:218947921894792190027549Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0650.4
NC_017068:2827568:284872528487252849108384Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative Xre family transcriptional regulator3e-0650.4
NC_010610:755000:763466763466763780315Lactobacillus fermentum IFO 3956, complete genomehypothetical protein6e-0649.7
NC_016048:1930089:194775419477541948359606Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein6e-0649.7
NC_014964:2272413:229248922924892292878390Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehelix-turn-helix domain-containing protein7e-0649.3
NC_013921:1915377:192814219281421928690549Thermoanaerobacter italicus Ab9 chromosome, complete genometranscriptional regulator, XRE family7e-0649.3
NC_016584:5388500:541244654124465412778333Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional regulator8e-0649.3
NC_016048:751000:769269769269769643375Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein8e-0649.3