Pre_GI Gene

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Host: NC_015379 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015379:908904 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
9089049181829279Putative adhesinQuickGO ontologyBLASTP
918185918718534Hypothetical proteinQuickGO ontologyBLASTP
9192019202141014Hypothetical proteinQuickGO ontologyBLASTP
920624921406783Hypothetical proteinQuickGO ontologyBLASTP
922409922903495Hypothetical proteinQuickGO ontology
9231149242051092Putative lipoproteinQuickGO ontologyBLASTP
925611925793183Hypothetical proteinQuickGO ontology
926273926545273hypothetical proteinBLASTP
926678927049372Hypothetical proteinQuickGO ontologyBLASTP
927376927648273hypothetical proteinBLASTP
9282539297341482Hypothetical proteinQuickGO ontologyBLASTP
929834930667834Putative short-chain dehydrogenaseQuickGO ontologyBLASTP
930689931624936Putative transcription factor AraC familyQuickGO ontologyBLASTP
93186293355316922-isopropylmalate synthaseQuickGO ontologyBLASTP
934024934500477Hypothetical proteinQuickGO ontologyBLASTP
935089935310222Putative transcription factor AlpA familyQuickGO ontologyBLASTP
935764936426663Hypothetical protein putative prophageQuickGO ontologyBLASTP
937726937971246Putative transcription factor CroCi familyQuickGO ontologyBLASTP
938158938403246Hypothetical proteinQuickGO ontologyBLASTP
938894939808915hypothetical proteinBLASTP
939854940357504Hypothetical proteinQuickGO ontology
940354941136783Hypothetical proteinQuickGO ontologyBLASTP
941117941689573Hypothetical proteinQuickGO ontologyBLASTP
9417059453463642Hypothetical proteinQuickGO ontologyBLASTP
9453479491533807Hypothetical proteinQuickGO ontologyBLASTP
9491509509581809Hypothetical proteinQuickGO ontologyBLASTP
9509559534772523Hypothetical proteinQuickGO ontologyBLASTP
9534839555462064Hypothetical proteinQuickGO ontologyBLASTP
955571955876306Hypothetical proteinQuickGO ontologyBLASTP
956123956620498Putative DNA repair proteinQuickGO ontologyBLASTP
956893957534642Hypothetical proteinQuickGO ontologyBLASTP
957674957892219hypothetical proteinBLASTP
957974958942969Hypothetical proteinQuickGO ontologyBLASTP
959020959349330hypothetical proteinBLASTP
960029960925897Putative transcription factor LysR familyQuickGO ontologyBLASTP
961326962195870Putative glutamin-asparagin-aseQuickGO ontologyBLASTP
9623749639091536Putative transposase IS66 familyQuickGO ontologyBLASTP
963971964306336Putative transposase IS66 familyQuickGO ontologyBLASTP
964303964644342Putative transposase IS66 familyQuickGO ontologyBLASTP
9647329669302199hypothetical proteinBLASTP
9669279688011875Hypothetical proteinQuickGO ontologyBLASTP
9688839701391257Putative integraseQuickGO ontologyBLASTP
970816971106291Conserved hypothetical protein putative exported proteinQuickGO ontologyBLASTP