Pre_GI: BLASTN Hits

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Query: NC_015379:908904 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Start: 908904, End: 971106, Length: 62203

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015379:25750002575000259943424435Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,04706BLASTN svgBLASTP svg
NC_007005:5500196*5500196552713626941Pseudomonas syringae pv. syringae B728a, complete genome01066BLASTN svgBLASTP svg
NC_002947:49943354994335504935655022Pseudomonas putida KT2440, complete genome01039BLASTN svgBLASTP svg
NC_002947:4484824*4484824451609931276Pseudomonas putida KT2440, complete genome01039BLASTN svgBLASTP svg
NC_010501:30000300007042840429Pseudomonas putida W619, complete genome01017BLASTN svgBLASTP svg
NC_002947:61525006152500618549933000Pseudomonas putida KT2440, complete genome0991BLASTN svgBLASTP svg
NC_012660:2045398*2045398210849663099Pseudomonas fluorescens SBW25 chromosome, complete genome0983BLASTN svgBLASTP svg
NC_008463:52469545246954530671059757Pseudomonas aeruginosa UCBPP-PA14, complete genome0922BLASTN svgBLASTP svg
NC_012660:57932005793200583260939410Pseudomonas fluorescens SBW25 chromosome, complete genome0771BLASTN svgBLASTP svg
NC_020209:38748443874844390437229529Pseudomonas poae RE*1-1-14, complete genome0761BLASTN svgBLASTP svg
NC_008463:4566976*4566976460307636101Pseudomonas aeruginosa UCBPP-PA14, complete genome0757BLASTN svgBLASTP svg
NC_004129:92647992647994509918621Pseudomonas fluorescens Pf-5, complete genome0648BLASTN svgBLASTP svg
NC_007492:85742885742888733529908Pseudomonas fluorescens PfO-1, complete genome8e-163583BLASTN svgBLASTP svg
NC_005773:47972424797242481709919858Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-146529BLASTN svgBLASTP svg
NC_007005:49927304992730502132828599Pseudomonas syringae pv. syringae B728a, complete genome2e-136496BLASTN svgBLASTP svg
NC_012660:26849812684981271787932899Pseudomonas fluorescens SBW25 chromosome, complete genome1e-133486BLASTN svgBLASTP svg
NC_012660:35731543573154359859925446Pseudomonas fluorescens SBW25 chromosome, complete genome8e-120440BLASTN svgBLASTP svg
NC_010501:73436373436376909934737Pseudomonas putida W619, complete genome5e-118434BLASTN svgBLASTP svg
NC_008027:77589677589680259926704Pseudomonas entomophila L48, complete genome1e-115426BLASTN svgBLASTP svg
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome7e-114420BLASTN svgBLASTP svg
NC_002947:53864895386489541416727679Pseudomonas putida KT2440, complete genome3e-113418BLASTN svgBLASTP svg
NC_012660:165559*16555920054534987Pseudomonas fluorescens SBW25 chromosome, complete genome6e-99371BLASTN svgBLASTP svg
NC_007005:830467*83046785407423608Pseudomonas syringae pv. syringae B728a, complete genome5e-90341BLASTN svgBLASTP svg
NC_020209:19495001949500197652927030Pseudomonas poae RE*1-1-14, complete genome8e-89337BLASTN svgBLASTP svg
NC_004129:195347*19534722067225326Pseudomonas fluorescens Pf-5, complete genome1e-87333BLASTN svgBLASTP svg
NC_004129:17418161741816177185030035Pseudomonas fluorescens Pf-5, complete genome5e-87331BLASTN svgBLASTP svg
NC_011770:2499432*2499432255697257541Pseudomonas aeruginosa LESB58, complete genome7e-77297BLASTN svgBLASTP svg
NC_004578:48696734869673488861018938Pseudomonas syringae pv. tomato str. DC3000, complete genome7e-77297BLASTN svgBLASTP svg
NC_020209:49437344943734497459930866Pseudomonas poae RE*1-1-14, complete genome4e-69272BLASTN svgBLASTP svg
NC_009439:12978511297851133481436964Pseudomonas mendocina ymp, complete genome6e-65258BLASTN svgBLASTP svg
NC_015740:2407500*2407500244682739328Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-59240BLASTN svgBLASTP svg
NC_015379:46303674630367466559935233Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,8e-52214BLASTN svgBLASTP svg
NC_021150:43504614350461437377523315Azotobacter vinelandii CA6, complete genome8e-46194BLASTN svgBLASTP svg
NC_012560:43504654350465437377923315Azotobacter vinelandii DJ, complete genome8e-46194BLASTN svgBLASTP svg
NC_002947:41675004167500424373376234Pseudomonas putida KT2440, complete genome2e-43186BLASTN svgBLASTP svg
NC_020209:39737639737645309955724Pseudomonas poae RE*1-1-14, complete genome4e-35159BLASTN svgBLASTP svg
NC_011992:33759293375929341716741239Acidovorax ebreus TPSY, complete genome3e-33153BLASTN svgBLASTP svg
NC_011770:42901429016842125521Pseudomonas aeruginosa LESB58, complete genome4e-32149BLASTN svgBLASTP svg
NC_011770:30498303049830308131431485Pseudomonas aeruginosa LESB58, complete genome4e-32149BLASTN svgBLASTP svg
NC_002516:27501282750128277880428677Pseudomonas aeruginosa PAO1, complete genome4e-32149BLASTN svgBLASTP svg
NC_018691:28109492810949283752026572Alcanivorax dieselolei B5 chromosome, complete genome6e-31145BLASTN svgBLASTP svg
NC_008463:28485682848568287992931362Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-29141BLASTN svgBLASTP svg
NC_010002:4572573*4572573461858346011Delftia acidovorans SPH-1, complete genome2e-28137BLASTN svgBLASTP svg
NC_010170:44630004463000451176948770Bordetella petrii, complete genome2e-28137BLASTN svgBLASTP svg
NC_010501:36715173671517370459933083Pseudomonas putida W619, complete genome2e-28137BLASTN svgBLASTP svg
NC_002516:42914429146861625703Pseudomonas aeruginosa PAO1, complete genome2e-27133BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome1e-26131BLASTN svgBLASTP svg
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome6e-25125BLASTN svgBLASTP svg
NC_015410:1324313*1324313135087526563Pseudomonas mendocina NK-01 chromosome, complete genome6e-25125BLASTN svgBLASTP svg
NC_004757:27300572730057278354453488Nitrosomonas europaea ATCC 19718, complete genome2e-24123BLASTN svgBLASTP svg
NC_020209:1847895*1847895187267824784Pseudomonas poae RE*1-1-14, complete genome2e-24123BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-23119BLASTN svgBLASTP svg
NC_011770:49241274924127497209947973Pseudomonas aeruginosa LESB58, complete genome6e-22115BLASTN svgBLASTP svg
NC_008463:47432964743296476909925804Pseudomonas aeruginosa UCBPP-PA14, complete genome6e-22115BLASTN svgBLASTP svg
NC_002516:89100089100091357122572Pseudomonas aeruginosa PAO1, complete genome6e-22115BLASTN svgBLASTP svg
NC_007005:51543175154317518283828522Pseudomonas syringae pv. syringae B728a, complete genome1e-19107BLASTN svgBLASTP svg
NC_010170:44096834409683443529725615Bordetella petrii, complete genome1e-19107BLASTN svgBLASTP svg
NC_018691:1322389*1322389134428821900Alcanivorax dieselolei B5 chromosome, complete genome1e-19107BLASTN svgBLASTP svg
NC_018691:18227311822731185319130461Alcanivorax dieselolei B5 chromosome, complete genome1e-19107BLASTN svgBLASTP svg
NC_018691:3525430*3525430358162756198Alcanivorax dieselolei B5 chromosome, complete genome1e-19107BLASTN svgBLASTP svg
NC_004578:63347356334735636397929245Pseudomonas syringae pv. tomato str. DC3000, complete genome9e-18101BLASTN svgBLASTP svg
NC_015458:2614108*2614108264388729780Pusillimonas sp. T7-7 chromosome, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_004578:35970833597083362009923017Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_002516:14740001474000150946535466Pseudomonas aeruginosa PAO1, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_007908:12521891252189127831426126Rhodoferax ferrireducens T118, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_007908:33639023363902338735723456Rhodoferax ferrireducens T118, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_015556:13043713043716194631510Pseudomonas fulva 12-X chromosome, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_012791:4736084*4736084478464848565Variovorax paradoxus S110 chromosome 1, complete genome8e-1591.7BLASTN svgBLASTP svg
NC_015422:3184823*3184823320638321561Alicycliphilus denitrificans K601 chromosome, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_015856:764651*76465179679232142Collimonas fungivorans Ter331 chromosome, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_005773:5149768*5149768521141661649Pseudomonas syringae pv. phaseolicola 1448A, complete genome8e-1281.8BLASTN svgBLASTP svg
NC_010943:45507324550732457350522774Stenotrophomonas maltophilia K279a, complete genome8e-1281.8BLASTN svgBLASTP svg
NC_014306:24763162476316249830421989Erwinia billingiae Eb661, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_012792:10916691091669111509923431Variovorax paradoxus S110 chromosome 2, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_007651:72952*7295214574172790Burkholderia thailandensis E264 chromosome I, complete sequence1e-1077.8BLASTN svgBLASTP svg
NC_008782:2568027*2568027262351455488Acidovorax sp. JS42, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_012660:21433762143376220316659791Pseudomonas fluorescens SBW25 chromosome, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_015379:2417312*2417312246459947288Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-1077.8BLASTN svgBLASTP svg
NC_015379:60239266023926604728023355Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-1077.8BLASTN svgBLASTP svg
NC_015379:42492384249238427562626389Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-1075.8BLASTN svgBLASTP svg
NC_012791:651480*65148067159920120Variovorax paradoxus S110 chromosome 1, complete genome5e-1075.8BLASTN svgBLASTP svg
NC_010498:11179381117938114953131594Escherichia coli SMS-3-5, complete genome5e-1075.8BLASTN svgBLASTP svg
NC_007912:3466966*3466966348462717662Saccharophagus degradans 2-40, complete genome5e-1075.8BLASTN svgBLASTP svg
NC_010512:10155571015557104522129665Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence2e-0973.8BLASTN svgBLASTP svg
NC_012792:70786470786472612718264Variovorax paradoxus S110 chromosome 2, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_021066:1712905*1712905175859645692Raoultella ornithinolytica B6, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_014562:1883517*1883517190910525589Pantoea vagans C9-1 chromosome, complete genome8e-0971.9BLASTN svgBLASTP svg
NC_010995:20181201815088330703Cellvibrio japonicus Ueda107, complete genome8e-0971.9BLASTN svgBLASTP svg
NC_007952:14160001416000143886822869Burkholderia xenovorans LB400 chromosome 2, complete sequence8e-0971.9BLASTN svgBLASTP svg
NC_007298:17598811759881180860548725Dechloromonas aromatica RCB, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_012660:1737423*1737423176616428742Pseudomonas fluorescens SBW25 chromosome, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_013446:16485561648556170768159126Comamonas testosteroni CNB-2, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_015379:1600715*1600715162682426110Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-0869.9BLASTN svgBLASTP svg
NC_015379:89441*8944111781628376Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-0869.9BLASTN svgBLASTP svg
NC_015224:35875003587500361767930180Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,1e-0767.9BLASTN svgBLASTP svg
NC_011071:18775001877500190261425115Stenotrophomonas maltophilia R551-3, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_009512:32825003282500331588733388Pseudomonas putida F1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_004547:91355391355395334239790Erwinia carotovora subsp. atroseptica SCRI1043, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_020209:19865031986503202425537753Pseudomonas poae RE*1-1-14, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_002947:737924*73792476633928416Pseudomonas putida KT2440, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_007947:48582848582850833122504Methylobacillus flagellatus KT, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_012660:3689223*3689223371658727365Pseudomonas fluorescens SBW25 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_012997:36519933651993367433122339Teredinibacter turnerae T7901, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_014931:4210029*4210029424439734369Variovorax paradoxus EPS chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_014931:4234288*4234288426496730680Variovorax paradoxus EPS chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015458:2998000*2998000302249324494Pusillimonas sp. T7-7 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015458:33289053328905335692528021Pusillimonas sp. T7-7 chromosome, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_015422:28582282858228292680368576Alicycliphilus denitrificans K601 chromosome, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_014910:19125521912552193924626695Alicycliphilus denitrificans BC chromosome, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_014910:1591003*1591003161459423592Alicycliphilus denitrificans BC chromosome, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_008781:2925818*2925818294540419587Polaromonas naphthalenivorans CJ2, complete genome7e-0661.9BLASTN svgBLASTP svg