Pre_GI Gene

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Host: NC_015379 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015379:4426827 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
442407644268652790putative Transcription factor unclassifiedQuickGO ontologyBLASTP
442682744283141488putative Transcription factor unclassifiedQuickGO ontologyBLASTP
44284984429433936putative Transcription factor AraC familyQuickGO ontologyBLASTP
44297694430491723hypothetical proteinBLASTP
44308724431285414Hypothetical protein putative exported proteinQuickGO ontology
443138844324311044putative Transcription factor AraC familyQuickGO ontologyBLASTP
443271244342081497putative aldehyde dehydrogenase NADQuickGO ontologyBLASTP
44342014435112912Dihydrodipicolinate synthaseQuickGO ontologyBLASTP
443539544366001206Putative oxidoreductaseQuickGO ontologyBLASTP
44368214437543723putative Transcription factor GntR familyQuickGO ontologyBLASTP
443772044387331014putative Transcription factor AraC familyQuickGO ontologyBLASTP
443879244397159244-hydroxyproline epimeraseQuickGO ontologyBLASTP
44398044440652849Glycine betaine ABC transporter permease componentQuickGO ontologyBLASTP
44406494441497849Glycine betaine ABC transporter permease componentQuickGO ontologyBLASTP
444149444426121119Glycine betaine ABC transporter ATP-binding componentQuickGO ontologyBLASTP
44426944443542849Glycine betaine ABC transporter periplasmic componentQuickGO ontologyBLASTP
44437324444415684putative Transcription factor GntR familyQuickGO ontologyBLASTP