Pre_GI: BLASTP Hits

Some Help

Query: NC_015379:4426827:4424076 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Start: 4424076, End: 4426865, Length: 2790

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014100:449541:4747094747094775672859Caulobacter segnis ATCC 21756 chromosome, complete genomewinged helix family transcriptional regulator3e-112406
NC_020453:7826358:7855205785520578580932889Agromonas oligotrophica S58 DNA, complete genomeputative ATPase2e-101371
NC_014217:1352777:1360468136046813633112844Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, winged helix family7e-98358
NC_011666:2335765:2355909235590923587662858Methylocella silvestris BL2, complete genome3e-96353
NC_009485:1946000:1956702195670219596202919Bradyrhizobium sp. BTAi1 chromosome, complete genometranscriptional regulator5e-94346
NC_007492:6372900:6402638640263864054902853Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, Winged helix family9e-89328
NC_007510:1959883:1998966199896620015992634Burkholderia sp. 383 chromosome 1, complete sequencetranscriptional regulator, winged helix family2e-84314
NC_015379:4426827:4426827442682744283141488Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, unclassified1e-77291
NC_014100:2782000:2782139278213927849822844Caulobacter segnis ATCC 21756 chromosome, complete genomewinged helix family transcriptional regulator9e-67255
NC_010676:3009980:3009980300998030114941515Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, winged helix family3e-65250
NC_009142:5647737:5652066565206656544082343Saccharopolyspora erythraea NRRL 2338, complete genomeprotein kinase/transcriptional regulator, LuxR family1e-61238
NC_008271:35909:5350253502567713270Rhodococcus sp. RHA1 plasmid pRHL3, complete sequenceprotein kinase/ transcriptional regulator, LuxR family1e-57225
NC_010512:110932:1170741170741185551482Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencetranscriptional regulator, winged helix family1e-56221
NC_012522:3224526:3240223324022332430362814Rhodococcus opacus B4, complete genomeputative LuxR family transcriptional regulator2e-54214
NC_012522:3224526:3224526322452632277893264Rhodococcus opacus B4, complete genomeputative serine/threonine protein kinase3e-53210
NC_012522:98567:1091781091781114962319Rhodococcus opacus B4, complete genomeputative LuxR family transcriptional regulator4e-51203
NC_015848:2859145:2865525286552528688693345Mycobacterium canettii CIPT 140010059, complete genomeputative transcriptional regulatory protein4e-51203
NC_019950:2830682:2837062283706228404063345Mycobacterium canettii CIPT 140060008 complete genomePutative LuxR family transcriptional regulator4e-51203
NC_008769:2754828:2761274276127427646873414Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative transcriptional regulatory protein (luxR-family)1e-50202
NC_012207:2747599:2754045275404527574583414Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative transcriptional regulatory protein1e-50202
NC_016804:2735897:2740639274063927440523414Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative transcriptional regulatory protein, LuxR family1e-50202
NC_008268:5745620:5761830576183057645022673Rhodococcus sp. RHA1, complete genomepossible transcriptional regulator, LuxR family2e-50201
NC_007777:1170406:1178211117821111806552445Frankia sp. CcI3, complete genometranscriptional regulator, LuxR family4e-50200
NC_002755:2788000:2792955279295527962963342Mycobacterium tuberculosis CDC1551, complete genometranscriptional regulator, LuxR family4e-50200
NC_009565:2806000:2810784281078428141973414Mycobacterium tuberculosis F11, complete genomehypothetical transcriptional regulatory protein, luxR-family3e-50200
NC_009525:2802987:2809435280943528128483414Mycobacterium tuberculosis H37Ra, complete genomeLuxR family transcriptional regulator3e-50200
NC_002945:2757821:2764268276426827676813414Mycobacterium bovis AF2122/97, complete genomeLuxR family transcriptional regulator3e-50200
NC_000962:2791019:2797467279746728008803414Mycobacterium tuberculosis H37Rv, complete genomePROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (LUXR-FAMILY)3e-50200
NC_003888:1395319:1406138140613814084802343Streptomyces coelicolor A3(2), complete genomemulti-domain regulatory protein8e-48192
NC_014318:6395392:6399946639994664026392694Amycolatopsis mediterranei U32 chromosome, complete genomepredicted ATPase4e-46187
NC_017186:6395435:6399989639998964021722184Amycolatopsis mediterranei S699 chromosome, complete genomeATPase3e-46187
NC_016943:1314500:1314500131450013177873288Blastococcus saxobsidens DD2, complete genomeMulti-domain regulatory protein2e-46187
NC_013947:3534209:3536416353641635391752760Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, LuxR family3e-44181
NC_008278:175500:1932821932821955912310Frankia alni ACN14a, complete genomeputative transcriptional regulator6e-43176
NC_013235:5849659:5871616587161658748973282Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, winged helix family1e-42176
NC_013757:1732747:1743495174349517463262832Geodermatophilus obscurus DSM 43160, complete genometranscriptional regulator, winged helix family2e-42175
NC_013757:2659930:2674458267445826773312874Geodermatophilus obscurus DSM 43160, complete genometranscriptional regulator, winged helix family3e-41171
NC_016582:6999074:7026400702640070305004101Streptomyces bingchenggensis BCW-1 chromosome, complete genomeAfsR-like regulatory protein4e-41170
NC_016627:3659500:3671029367102936744903462Clostridium clariflavum DSM 19732 chromosome, complete genomeputative ATPase4e-41170
NC_014815:2055286:2070183207018320734463264Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, winged helix family3e-40167
NC_019673:4687289:4697284469728447004093126Saccharothrix espanaensis DSM 44229 complete genomeProtein kinase7e-39163
NC_016111:3577572:3599142359914236023393198Streptomyces cattleya NRRL 8057, complete genomeAfsR-like regulatory protein3e-38160
NC_011831:853433:8542868542868566252340Chloroflexus aggregans DSM 9485, complete genometranscriptional regulator, XRE family2e-36155
NC_019673:3253650:3276007327600732792493243Saccharothrix espanaensis DSM 44229 complete genomeATPase-like protein2e-34148
NC_013159:3858425:3858425385842538616073183Saccharomonospora viridis DSM 43017, complete genomepredicted ATPase7e-34146
NC_006087:2214209:2232154223215422344032250Leifsonia xyli subsp. xyli str. CTCB07, complete genometranscriptional regulator, LuxR family4e-32140
NC_009767:4819000:4837476483747648406703195Roseiflexus castenholzii DSM 13941, complete genometranscriptional regulator, SARP family5e-29130
NC_013947:3785332:3786080378608037888242745Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, LuxR family3e-27124
NC_008268:3418000:3423885342388534257231839Rhodococcus sp. RHA1, complete genomeprobable transcriptional regulator, LuxR family2e-26121
NC_013947:460398:4835324835324866183087Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, winged helix family2e-25118
NC_015711:3697808:3715641371564137188173177Myxococcus fulvus HW-1 chromosome, complete genomeadenylate/guanylate cyclase domain-containing protein9e-23109
NC_015312:61752:7863778637814442808Pseudonocardia dioxanivorans CB1190 chromosome, complete genomewinged helix family transcriptional regulator2e-20102
NC_015671:3211972:3226190322619032294293240Cellvibrio gilvus ATCC 13127 chromosome, complete genometranscriptional regulator, winged helix family7e-1893.2
NC_018681:5490963:5520274552027455227752502Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein4e-1481.3
NC_002947:5961096:597811559781155979107993Pseudomonas putida KT2440, complete genomeDNA-binding response regulator, LuxR family2e-1275.5
NC_020302:2116468:2137332213733221388551524Corynebacterium halotolerans YIM 70093 = DSM 44683, completeATPase-like protein5e-1273.9
NC_013361:5319497:5326694532669453282321539Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding transcriptional activator CadC8e-1066.6
NC_010468:4252940:4272533427253342740711539Escherichia coli ATCC 8739, complete genometranscriptional regulator, CadC7e-1066.6
NC_017093:8518961:853984685398468540532687Actinoplanes missouriensis 431, complete genomeputative two-component system response regulator1e-0965.9
NC_013947:656140:6737986737986762182421Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, XRE family1e-0759.3
NC_009138:467268:496590496590497279690Herminiimonas arsenicoxydans, complete genomeresponse regulator in two-component regulatory system with PhoR (or CreC), regulation of Pi uptake (OmpR family)2e-0758.9
NC_015732:773143:803449803449804156708Spirochaeta caldaria DSM 7334 chromosome, complete genometwo component transcriptional regulator, winged helix family2e-0758.5
NC_011751:4293966:4306667430666743083641698Escherichia coli UMN026 chromosome, complete genomeinvasion protein regulator5e-0757.4
NC_011750:4390000:4424887442488744265841698Escherichia coli IAI39 chromosome, complete genomeinvasion protein regulator5e-0757.4
NC_014624:1369642:138097613809761381482507Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein7e-0757
NC_013947:4413382:4426906442690644298572952Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, SARP family7e-0757
NC_009922:411434:440926440926441621696Alkaliphilus oremlandii OhILAs, complete genometwo component transcriptional regulator, winged helix family1e-0656.6
NC_009725:3763922:377117037711703771892723Bacillus amyloliquefaciens FZB42, complete genomeMrsR22e-0655.1
NC_015738:220000:236886236886237566681Eggerthella sp. YY7918, complete genomehypothetical protein2e-0655.1
NC_004459:2025436:2048197204819720497711575Vibrio vulnificus CMCP6 chromosome I, complete sequenceTranscriptional regulator CadC2e-0655.1
NC_014965:997344:1033178103317810347581581Vibrio vulnificus MO6-24/O chromosome I, complete sequencetranscriptional activator of cad operon3e-0655.1
NC_020410:3755978:376335137633513764073723Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeResponse regulator3e-0654.7
NC_020209:997385:103954610395461040235690Pseudomonas poae RE*1-1-14, complete genometwo-component system response regulator4e-0654.3
NC_020541:3156500:3165653316565331683102658Rhodanobacter sp. 2APBS1, complete genometranscriptional regulatory protein,protein kinase family protein5e-0653.9