Pre_GI Gene

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Host: NC_015379 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015379:4249238 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
424923842508781641putative ABC transporter permease componentQuickGO ontologyBLASTP
425089042521941305putative ABC transporter ATP-binding componentQuickGO ontologyBLASTP
425227442533171044putative Histidine kinase ClassicQuickGO ontologyBLASTP
42533044253942639putative Response regulator NarL familyQuickGO ontologyBLASTP
42540174254559543Conserved hypothetical protein putative exported proteinQuickGO ontologyBLASTP
42547914254988198hypothetical proteinBLASTP
42552124256129918hypothetical proteinBLASTP
42562324257098867putative Transcription factor LysR familyQuickGO ontologyBLASTP
42575284257806279Hypothetical proteinQuickGO ontologyBLASTP
42580374258630594hypothetical proteinBLASTP
42585754259135561hypothetical proteinBLASTP
42594174260169753Hypothetical proteinQuickGO ontology
426018742631232937Hypothetical proteinQuickGO ontologyBLASTP
42638094264600792putative dehydrogenaseQuickGO ontologyBLASTP
42646854265602918putative Transcription factor LysR familyQuickGO ontologyBLASTP
42656884265942255Conserved hypothetical protein putative exported proteinQuickGO ontologyBLASTP
42661104266886777putative dehydrogenaseQuickGO ontologyBLASTP
42668804267257378hypothetical proteinBLASTP
42673054267652348putative response regulator NarL familyQuickGO ontologyBLASTP
42677594268676918putative Transcription factor LysR familyQuickGO ontologyBLASTP
426870042701301431putative response regulator NarL familyQuickGO ontologyBLASTP
42702284271001774Conserved hypothetical protein putative exported proteinQuickGO ontologyBLASTP
427106642726491584putative GMC oxidoreductaseQuickGO ontologyBLASTP
42727384273163426putative acetyltransferaseQuickGO ontologyBLASTP
42735134274172660putative NADP oxidoreductase coenzyme F420-dependentQuickGO ontologyBLASTP
42742524274995744putative dehydrogenaseQuickGO ontologyBLASTP
42749944275626633putative Transcription factor TetR familyQuickGO ontologyBLASTP