Pre_GI: BLASTP Hits

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Query: NC_015379:4249238:4255212 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Start: 4255212, End: 4256129, Length: 918

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:2642881:266016526601652661082918Pseudomonas fluorescens F113 chromosome, complete genomedrug/metabolite transporter permease3e-124444
NC_016047:683368:699679699679700581903Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeeama family transporter8e-31134
NC_014221:591785:614960614960615919960Truepera radiovictrix DSM 17093 chromosome, complete genomeprotein of unknown function DUF6 transmembrane2e-30133
NC_020272:20435:284262842629337912Bacillus amyloliquefaciens IT-45, complete genomepermease4e-29129
NC_019842:3921424:393535939353593936270912Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,permease6e-29128
NC_020410:3868573:388088938808893881800912Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative permease6e-28124
NC_017191:3901914:391095039109503911831882Bacillus amyloliquefaciens XH7 chromosome, complete genomepermease1e-26120
NC_017188:3900951:390925839092583910139882Bacillus amyloliquefaciens TA208 chromosome, complete genomeputative permease1e-26120
NC_008711:424482:429761429761430702942Arthrobacter aurescens TC1, complete genomeputative Integral membrane protein DUF63e-0962.8