Pre_GI Gene

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Host: NC_015379 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015379:3736500 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
373714637381711026putative NADPHquinone oxidoreductaseQuickGO ontologyBLASTP
37384293739343915putative Transcription factor LysR familyQuickGO ontologyBLASTP
37398583740493636putative transport-related LysE family membrane proteinQuickGO ontologyBLASTP
374052137424131893putative methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
37425153743276762Amino-acid ABC transporter ATP-binding componentQuickGO ontologyBLASTP
37433293744039711Amino-acid ABC transporter permease componentQuickGO ontologyBLASTP
37440363744764729Amino-acid ABC transporter permease componentQuickGO ontologyBLASTP
37448173745542726putative amino acid ABC transporter periplasmic componentQuickGO ontologyBLASTP
37457733746090318putative quaternary ammonium compound-resistance proteinQuickGO ontologyBLASTP
374622537474271203putative cystathionine gamma-lyaseQuickGO ontologyBLASTP
374747937488971419putative aldehyde dehydrogenaseQuickGO ontologyBLASTP
374890037499491050putative homoserine dehydrogenaseQuickGO ontologyBLASTP
37500673750504438putative Transcription factor AsnC familyQuickGO ontologyBLASTP
375051937519221404putative threonine synthaseQuickGO ontologyBLASTP
37521753752657483Putative protein dinBQuickGO ontologyBLASTP
37527143753607894putative dihydrodipicolinate synthaseQuickGO ontologyBLASTP
37536373754332696hypothetical proteinBLASTP
37544933755095603putative Transcription factor Xre familyQuickGO ontologyBLASTP
37554513756368918putative Transcription factor LysR familyQuickGO ontologyBLASTP
37565573757306750putative 3-oxoacyl-acyl-carrier protein reductaseQuickGO ontologyBLASTP
375740237587031302putative transport system membrane protein Major Facilitator SuperfamilyQuickGO ontologyBLASTP
37587203759568849putative transketolase N-terminal domain proteinQuickGO ontologyBLASTP
375956537605871023Putative Transketolase C-terminal domain proteinQuickGO ontologyBLASTP
376116737634492283Putative cation transport ATPaseQuickGO ontologyBLASTP
37636893764336648Conserved hypothetical protein putative transport-associated proteinQuickGO ontologyBLASTP
376447337658491377Putative erythromycin esteraseQuickGO ontologyBLASTP
37658313766526696hypothetical proteinBLASTP
37665193767223705hypothetical proteinBLASTP