Pre_GI Gene

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Host: NC_015379 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015379:3570658 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
357065835728832226hypothetical proteinBLASTP
35734333574137705Putative two-component system response regulatorQuickGO ontologyBLASTP
357413735755101374putative two-component system sensor kinaseQuickGO ontologyBLASTP
35756393575899261hypothetical proteinBLASTP
35760413576991951putative short chain dehydrogenaseQuickGO ontologyBLASTP
357706235783841323putative transporter membrane proteinQuickGO ontologyBLASTP
35784563578956501Hypothetical proteinQuickGO ontologyBLASTP
35790723579707636hypothetical proteinBLASTP
35797513580296546hypothetical protein
358039335818081416putative D-serineD-alanineglycine transporterQuickGO ontologyBLASTP
358198935830441056ornithine cyclodeaminaseQuickGO ontologyBLASTP
358309535841291035putative acetylpolyamine aminohydrolaseQuickGO ontologyBLASTP
35842493584749501putative transcriptional regulatory proteinQuickGO ontologyBLASTP
35849323585339408hypothetical proteinBLASTP
35860613586996936putative dipeptide ABC transporter ATP-binding componentQuickGO ontologyBLASTP
35870293588018990putative dipeptide ABC transporter ATP-binding componentQuickGO ontologyBLASTP
35880213588902882putative dipeptide transport system ABC transporter permease componentQuickGO ontologyBLASTP
358890435899201017Putative dipeptide ABC transporter permease componentQuickGO ontologyBLASTP
358999735915951599putative dipeptide ABC transporter periplasmic componentQuickGO ontologyBLASTP
35917393592278540D-alanyl-D-alanine dipeptidaseQuickGO ontologyBLASTP
35923173593171855conserved hypothetical protein containing Helix-turn-helix domain rpiR familyQuickGO ontologyBLASTP
359335435944961143putative major facilitator transporterQuickGO ontologyBLASTP