Pre_GI Gene

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Host: NC_014323 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014323:5219154 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
52191545220080927N-acetylglucosamine kinaseQuickGO ontologyBLASTP
522007752212041128N-acetylglucosamine-6-phosphate deacetylaseQuickGO ontologyBLASTP
522119752222071011glucosamine 6-phosphate synthaseQuickGO ontologyBLASTP
52223925223279888MetEMetH family transcription regulator proteinQuickGO ontologyBLASTP
522375852254251668hypothetical proteinBLASTP
522577552289243150HsdR-like type I restriction modification system proteinQuickGO ontologyBLASTP
522894352302081266Type I site-specific deoxyribonuclease specificity subunitQuickGO ontologyBLASTP
523021052327922583Type I restriction-modification system methyltransferase subunitQuickGO ontologyBLASTP
52329845233505522sortaseacetyltransferaseQuickGO ontologyBLASTP
52338735234586714hypothetical proteinBLASTP
523463852364101773choline dehydrogenase-like proteinQuickGO ontologyBLASTP
523642252376931272membrane-bound D-gluconate 2-dehydrogenase cytochrome c subunitQuickGO ontologyBLASTP
52378435238274432hypothetical protein
52382985238726429ArsR family transcription regulator proteinQuickGO ontologyBLASTP
523875652398441089xenobiotic reductase AQuickGO ontologyBLASTP
52403785241001624glutathione S-transferaseQuickGO ontologyBLASTP
52412225242118897drugmetabolite transporter DMT superfamily permeaseQuickGO ontologyBLASTP