Pre_GI: BLASTP Hits

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Query: NC_014323:5219154:5225775 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 5225775, End: 5228924, Length: 3150

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010645:369408:3929003929003960343135Bordetella avium 197N, complete genomerestriction-modification system, endonuclease subunit01663
NC_009832:4521585:4539525453952545427103186Serratia proteamaculans 568, complete genometype I site-specific deoxyribonuclease, HsdR family01358
NC_014562:3985500:3994631399463139978643234Pantoea vagans C9-1 chromosome, complete genometype I restriction enzyme R protein01325
NC_014328:303063:3461993461993501553957Clostridium ljungdahlii ATCC 49587 chromosome, complete genometype I restriction enzyme, endonuclease subunit01182
NC_014169:1784435:1790719179071917940093291Bifidobacterium longum subsp. longum JDM301 chromosome, completeHsdR-like protein of type I restriction modification system01144
NC_010816:2326453:2341549234154923448363288Bifidobacterium longum DJO10A, complete genomeType I site-specific restriction-modification system R subunit01140
NC_015052:1771976:1777032177703217803193288Bifidobacterium longum subsp. infantis 157F, complete genomedeoxyribonuclease01140
NC_004307:2208591:2222402222240222256893288Bifidobacterium longum NCC2705, complete genomeHsdR-like protein of type I restriction modification system01139
NC_017221:535000:5490715490715523613291Bifidobacterium longum subsp. longum KACC 91563 chromosome,HsdR-like protein of type I restriction modification system01136
NC_014638:1333976:1340750134075013440193270Bifidobacterium bifidum PRL2010 chromosome, complete genomeHsdR-like protein type I restriction modification system01132
NC_014616:1296287:1301270130127013045393270Bifidobacterium bifidum S17 chromosome, complete genomeHsdR-like protein of Type I restriction-modification system01130
NC_010545:1475410:1487761148776114909553195Corynebacterium urealyticum DSM 7109, complete genometype I restriction-modification system, restriction subunit01105
NC_020302:744956:7596427596427628213180Corynebacterium halotolerans YIM 70093 = DSM 44683, completeHsdR family type I site-specific deoxyribonuclease0759
NC_016023:1959255:1969946196994619730293084Bacillus coagulans 36D1 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease4e-96353
NC_015634:2595500:2609416260941626124993084Bacillus coagulans 2-6 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family1e-94348
NC_011837:2605409:2605409260540926086183210Clostridium kluyveri NBRC 12016, complete genomehypothetical protein5e-93343
NC_009706:2673906:2673906267390626771153210Clostridium kluyveri DSM 555 chromosome, complete genomeType I restriction enzyme, endonuclease subunit5e-93343
NC_016584:1998000:2039833203983320430423210Desulfosporosinus orientis DSM 765 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-91338
NC_020450:875757:8913718913718943582988Lactococcus lactis subsp. lactis IO-1 DNA, complete genometype I restriction enzyme R protein3e-91337
NC_020164:89214:1035451035451063402796Staphylococcus warneri SG1, complete genometype I site-specific restriction-modification system restriction subunit4e-87323
NC_014219:192555:2143022143022174663165Bacillus selenitireducens MLS10 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family1e-85318
NC_014634:28690:4845948459512632805Ilyobacter polytropus DSM 2926 plasmid pILYOP02, complete sequencetype I site-specific deoxyribonuclease, HsdR family2e-84314
NC_017068:1143515:1186826118682611898583033Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative type I restriction-modification system R subunit3e-83310
NC_007681:542494:5593295593295620372709Methanosphaera stadtmanae DSM 3091, complete genomeputative type I restriction-modification system, restriction subunit5e-82306
NC_014727:995480:1001764100176410047843021Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,hsdr-type i restriction subunit3e-81303
NC_008054:899441:9055129055129085323021Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeType I restriction-modification system, restriction subunit4e-80300
NC_003112:844000:8588708588708616352766Neisseria meningitidis MC58, complete genomeputative type I restriction enzyme EcoR124II R protein2e-79298
NC_017516:1439775:1442427144242714451922766Neisseria meningitidis H44/76 chromosome, complete genome2e-79298
NC_014752:1530000:1533219153321915363173099Neisseria lactamica ST-640, complete genome1e-79298
NC_017515:1429317:1434025143402514371233099Neisseria meningitidis M04-240196 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease5e-79296
NC_006322:741516:7528027528027559603159Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-78295
NC_006270:741731:7530187530187561763159Bacillus licheniformis ATCC 14580, complete genomeHsdRI1e-78295
NC_008571:744500:7519097519097549113003Gramella forsetii KT0803, complete genometype I restriction-modification system restricti on subunit1e-77292
NC_012912:1053618:1077362107736210803342973Dickeya zeae Ech1591, complete genometype I site-specific deoxyribonuclease, HsdR family8e-78292
NC_010682:460523:4776464776464806152970Ralstonia pickettii 12J chromosome 1, complete sequencetype I site-specific deoxyribonuclease, HsdR family7e-78292
NC_014618:690056:7075817075817104962916Enterobacter cloacae SCF1 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease7e-78292
NC_016026:1224129:1236374123637412392052832Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeputative type I restriction enzyme R protein2e-77291
NC_011601:4856717:4862628486262848657443117Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometype I restriction-modification enzyme R subunit2e-77291
NC_017033:678321:6880396880396911403102Frateuria aurantia DSM 6220 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease3e-76287
NC_017514:1396000:1399124139912414022553132Neisseria meningitidis M01-240149 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease4e-76287
NC_017505:841496:8555268555268586573132Neisseria meningitidis alpha710 chromosome, complete genomeputative type I restriction enzyme EcoR124II R protein4e-76287
NC_011830:4187362:4196584419658441997123129Desulfitobacterium hafniense DCB-2, complete genometype I site-specific deoxyribonuclease, HsdR family6e-76286
NC_015761:299386:3128843128843159913108Salmonella bongori NCTC 12419, complete genometype I restriction enzyme1e-75285
NC_013949:939695:9506209506209536493030Helicobacter mustelae 12198 chromosome, complete genometype I restriction-modification system restriction enzyme2e-75284
NC_003902:555699:5610245610245640082985Xanthomonas campestris pv. campestris str. ATCC 33913, completetype I restriction-modification system endonuclease2e-75284
NC_007086:557789:5631145631145660982985Xanthomonas campestris pv. campestris str. 8004, complete genometype I restriction-modification system endonuclease2e-75284
NC_005139:796546:8143278143278174133087Vibrio vulnificus YJ016 chromosome I, complete sequencetype I site-specific restriction-modification system, R (restriction) subunit3e-75284
NC_015144:47783:8051080510836113102Weeksella virosa DSM 16922 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family7e-75282
NC_014815:6616500:6668095666809566712143120Micromonospora sp. L5 chromosome, complete genometype i site-specific deoxyribonuclease, hsdr family2e-74281
NC_005090:1082213:1086874108687410896932820Wolinella succinogenes DSM 1740, complete genomeHSDR PROTEIN PROBABLE TYPE I RESTRICTION ENZYME RESTRICTIONCHAIN2e-74281
NC_005823:1105524:1118133111813311212313099Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130type I restriction enzyme3e-74280
NC_016514:506611:5193375193375224563120Enterobacter cloacae EcWSU1 chromosome, complete genometype I restriction enzyme R protein3e-74280
NC_007778:3470661:3480367348036734834833117Rhodopseudomonas palustris HaA2, complete genometype I site-specific deoxyribonuclease, HsdR family7e-74279
NC_008786:3915000:3927676392767639306302955Verminephrobacter eiseniae EF01-2, complete genometype I site-specific deoxyribonuclease, HsdR family1e-73278
NC_009053:313779:3226483226483257853138Actinobacillus pleuropneumoniae L20, complete genomeputative type I site-specific restriction-modification system, R (restriction) subunit2e-73278
NC_016940:271500:2841372841372869472811Saprospira grandis str. Lewin chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease3e-73277
NC_014655:1396672:1400184140018414032823099Leadbetterella byssophila DSM 17132 chromosome, complete genometype i site-specific deoxyribonuclease, hsdr family5e-73276
NC_012491:743883:7553787553787584763099Brevibacillus brevis NBRC 100599, complete genometype I restriction modification system endonuclease9e-73276
NC_010645:558974:5646425646425677433102Bordetella avium 197N, complete genometype I restriction enzyme EcoR124II R protein1e-72275
NC_007508:570000:5737155737155766992985Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometype I site-specific deoxyribonuclease (restriction subunit)3e-72274
NC_013037:6281164:6318483631848363214072925Dyadobacter fermentans DSM 18053, complete genometype I site-specific deoxyribonuclease, HsdR family4e-72273
NC_016838:85487:97669976691001642496Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS1,putative type I restriction-modification enzyme R subunit5e-72273
NC_020054:4161049:4175461417546141783312871Fibrella aestuarina BUZ 2 drat genometype I restriction enzyme, R subunit8e-72272
NC_010939:321492:3322653322653353993135Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeputative type I site-specific restriction- modification system, R (restriction) subunit8e-72272
NC_010278:315941:3274473274473305843138Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,type I site-specific deoxyribonuclease1e-71272
NC_015703:4483500:4501508450150845043452838Runella slithyformis DSM 19594 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease3e-71271
NC_014638:183115:2129242129242159683045Bifidobacterium bifidum PRL2010 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-71271
NC_006513:1547092:1556324155632415593563033Azoarcus sp. EbN1, complete genomeType I restriction-modification system endonuclease1e-71271
NC_009052:4335754:4348197434819743512683072Shewanella baltica OS155, complete genometype I site-specific deoxyribonuclease, HsdR family7e-71269
NC_012669:549500:5549985549985580453048Beutenbergia cavernae DSM 12333, complete genometype I site-specific deoxyribonuclease, HsdR family1e-70268
NC_014371:1218813:1238617123861712414602844Prevotella melaninogenica ATCC 25845 chromosome chromosome II,type I site-specific deoxyribonuclease, HsdR family2e-70268
NC_016589:183432:2053962053962084733078Burkholderia sp. YI23 chromosome 1, complete sequenceHsdR family type I site-specific deoxyribonuclease2e-70268
NC_014330:169862:1847931847931878673075Brachyspira pilosicoli 95/1000 chromosome, complete genometype-I restriction endonuclease R subunit HsdR9e-70266
NC_015565:2408669:2418136241813624212373102Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completetype I site-specific deoxyribonuclease, HsdR family9e-70266
NC_014314:212579:2213412213412243913051Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeHsdR family type I site-specific deoxyribonuclease1e-69265
NC_008786:2729635:2740582274058227436323051Verminephrobacter eiseniae EF01-2, complete genometype I site-specific deoxyribonuclease, HsdR family1e-69265
NC_008699:1132790:1169096116909611721373042Nocardioides sp. JS614, complete genometype I site-specific deoxyribonuclease, HsdR family3e-69264
NC_015437:767572:7808307808307838893060Selenomonas sputigena ATCC 35185 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family3e-69264
NC_016012:665171:6761916761916794063216Candidatus Arthromitus sp. SFB-rat-Yit, complete genometype I site-specific deoxyribonuclease, HsdR family6e-69263
NC_010571:1334000:1346278134627813493553078Opitutus terrae PB90-1, complete genometype I site-specific deoxyribonuclease, HsdR family2e-68261
NC_018604:1292889:1292889129288912959963108Brachyspira pilosicoli WesB complete genometype-I restriction endonuclease R subunit HsdR4e-68260
NC_018607:1505908:1515795151579515182542460Brachyspira pilosicoli B2904 chromosome, complete genometype-I restriction endonuclease R subunit HsdR2e-67258
NC_014215:142500:1547171547171577553039Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,2e-65251
NC_014448:414784:4202474202474238103564Mycoplasma hyorhinis HUB-1 chromosome, complete genomeType I site-specific deoxyribonuclease, HsdR family6e-61236
NC_014970:530748:5415305415305444782949Mycoplasma haemofelis str. Langford 1, complete genometype I restriction-modification system endonuclease, R subunit2e-57224
NC_015222:3137167:3146394314639431500143621Nitrosomonas sp. AL212 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family4e-47190
NC_013720:1382561:1399580139958014026423063Pirellula staleyi DSM 6068, complete genometype I site-specific deoxyribonuclease, HsdR family6e-40167
NC_006270:4149004:4163372416337241664793108Bacillus licheniformis ATCC 14580, complete genomeputative Type I site-specific deoxyribonuclease HsdR8e-40166
NC_006322:4149500:4163487416348741665943108Bacillus licheniformis ATCC 14580, complete genomehypothetical protein8e-40166
NC_016023:1923170:1933430193343019365373108Bacillus coagulans 36D1 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease4e-39164
NC_017271:1289278:1299052129905213021743123Xanthomonas campestris pv. raphani 756C chromosome, completetype I restriction-modification system restriction subunit5e-39164
NC_016023:267581:2811592811592842663108Bacillus coagulans 36D1 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease8e-39163
NC_007575:973559:9886579886579917493093Sulfurimonas denitrificans DSM 1251, complete genomeType I site-specific deoxyribonuclease HsdR7e-39163
NC_008601:753221:7532217532217563313111Francisella tularensis subsp. novicida U112, complete genometype I restriction-modification system, subunit R (restriction)5e-39163
NC_010581:2999002:3042685304268530457683084Beijerinckia indica subsp. indica ATCC 9039, complete genometype I site-specific deoxyribonuclease, HsdR family2e-37158
NC_011901:1860887:1886648188664818897733126Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetype I restriction-modification system restriction subunit3e-37158
NC_003901:2727361:2732159273215927352873129Methanosarcina mazei Go1, complete genometype I restriction-modification system restriction subunit4e-37157
NC_021184:207492:2087402087402117933054Desulfotomaculum gibsoniae DSM 7213, complete genometype I site-specific deoxyribonuclease, HsdR family2e-36155
NC_017187:814940:8294958294958326533159Arcobacter butzleri ED-1, complete genomedeoxyribonuclease9e-35149
NC_019902:1863162:1865231186523118683473117Thioalkalivibrio nitratireducens DSM 14787, complete genomeType I restriction-modification system, restriction subunit R8e-35149
NC_014550:2562053:2587519258751925906203102Arthrobacter arilaitensis Re117, complete genometype I restriction-modification system restriction subunit9e-34146
NC_015942:2213710:2230085223008522331623078Acidithiobacillus ferrivorans SS3 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease1e-33145
NC_014934:3786132:3795481379548137985853105Cellulophaga algicola DSM 14237 chromosome, complete genometype i site-specific deoxyribonuclease, hsdr family2e-33145
NC_012778:1573847:1585790158579015889693180Eubacterium eligens ATCC 27750, complete genometype I restriction enzyme, R subunit2e-33144
NC_009943:272158:2740102740102771263117Candidatus Desulfococcus oleovorans Hxd3, complete genometype I site-specific deoxyribonuclease, HsdR family3e-33144
NC_012779:3316877:3328524332852433316193096Edwardsiella ictaluri 93-146, complete genometype I restriction enzyme R protein (HsdR)4e-33144
NC_013508:3188978:3236284323628432393793096Edwardsiella tarda EIB202, complete genometype I site-specific deoxyribonuclease, HsdR family5e-33144
NC_014216:2334568:2347674234767423508863213Desulfurivibrio alkaliphilus AHT2 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family8e-33143
NC_014814:3892000:3904593390459339076793087Mycobacterium sp. Spyr1 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family8e-33143
NC_012917:985617:1000970100097010040653096Pectobacterium carotovorum subsp. carotovorum PC1, complete genometype I site-specific deoxyribonuclease, HsdR family6e-33143
NC_011283:5011497:5014646501464650177413096Klebsiella pneumoniae 342 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease1e-32142
NC_018604:2579000:2606937260693726100713135Brachyspira pilosicoli WesB complete genometype I site-specific deoxyribonuclease HsdR1e-32142
NC_008529:906576:964665964665965621957Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete2e-32142
NC_008529:887008:893797893797894753957Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete2e-32142
NC_019977:1353332:1364126136412613672573132Methanomethylovorans hollandica DSM 15978, complete genometype I site-specific deoxyribonuclease, HsdR family4e-32140
NC_016590:1380092:1387475138747513905613087Burkholderia sp. YI23 chromosome 3, complete sequenceHsdR family type I site-specific deoxyribonuclease4e-32140
NC_013929:3299736:3328881332888133319673087Streptomyces scabiei 87.22 chromosome, complete genometype I restriction protein1e-31139
NC_011601:1114104:1150984115098411540793096Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease1e-31139
NC_016803:2431672:2444040244404024472193180Desulfovibrio desulfuricans ND132 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease5e-31137
NC_015635:4864349:4877119487711948802203102Microlunatus phosphovorus NM-1, complete genometype I restriction-modification system restriction subunit1e-30135
NC_015581:680460:6804606804606835583099Thioalkalimicrobium cyclicum ALM1 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family1e-29132
NC_010994:859500:8752208752208782883069Rhizobium etli CIAT 652, complete genomeprobable type I restriction-modification system protein, restriction subunit1e-29132
NC_013235:5127148:5140644514064451437303087Nakamurella multipartita DSM 44233, complete genometype I site-specific deoxyribonuclease, HsdR family7e-29130
NC_009665:2602000:2619809261980926230003192Shewanella baltica OS185 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease1e-28129
NC_012440:1215838:1223563122356312267243162Persephonella marina EX-H1, complete genometype I restriction enzyme R protein (HsdR)2e-28128
NC_007164:1434305:1469838146983814729243087Corynebacterium jeikeium K411, complete genomeputative DNA restriction-modification system, restriction enzyme7e-28126
NC_016051:1005188:1015085101508510180362952Thermococcus sp. AM4 chromosome, complete genomeType I restriction-modification system restriction subunit R7e-28126
NC_021064:793098:8054238054238085783156Propionibacterium avidum 44067, complete genomeHsdR family type I site-specific deoxyribonuclease4e-27124
NC_018876:587094:6119046119046148942991Methanolobus psychrophilus R15 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family4e-27124
NC_015320:1690047:1692564169256416954522889Archaeoglobus veneficus SNP6 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family4e-27124
NC_015865:229883:2364722364722394202949Thermococcus sp. 4557 chromosome, complete genomeType I restriction-modification system restriction subunit R7e-27123
NC_009633:4097536:4139932413993241430573126Alkaliphilus metalliredigens QYMF chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease3e-25118
NC_015161:1556766:1587325158732515906483324Deinococcus proteolyticus MRP chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family1e-23113
NC_018721:943801:9515369515369545383003Psychroflexus torquis ATCC 700755 chromosome, complete genomeType I restriction-modification system, restriction subunit HsdR5e-23110
NC_013592:446092:4567674567674600513285Dickeya dadantii Ech586, complete genometype I site-specific deoxyribonuclease, HsdR family2e-22108
NC_009033:755226:7623997623997654613063Staphylothermus marinus F1, complete genometype I site-specific deoxyribonuclease, HsdR family3e-22108
NC_014217:2760898:2767311276731127705263216Starkeya novella DSM 506 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family1e-21105
NC_007413:1405817:1412992141299214159162925Anabaena variabilis ATCC 29413, complete genomeType I site-specific deoxyribonuclease HsdR3e-21104
NC_016620:781995:7969917969918002093219Bacteriovorax marinus SJ, complete genomeputative type I restriction enzyme2e-20102
NC_008541:1042322:1063872106387210669943123Arthrobacter sp. FB24 chromosome 1, complete sequencetype I site-specific deoxyribonuclease, HsdR family2e-20102
NC_011832:1122268:1128539112853911314362898Candidatus Methanosphaerula palustris E1-9c, complete genometype I site-specific deoxyribonuclease, HsdR family2e-20102
NC_002937:1764117:1777728177772817810273300Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetype I restriction-modification enzyme, R subunit3e-20101
NC_011831:2213306:2213965221396522169132949Chloroflexus aggregans DSM 9485, complete genometype I site-specific deoxyribonuclease, HsdR family6e-20100
NC_014210:3671495:3686800368680036900573258Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,type I site-specific deoxyribonuclease, HsdR family1e-1999.8
NC_018876:2151226:2157605215760521608053201Methanolobus psychrophilus R15 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family1e-1999.8
NC_010003:1126800:1139276113927611424793204Petrotoga mobilis SJ95, complete genometype I site-specific deoxyribonuclease, HsdR family1e-1999.4
NC_010617:558954:5720755720755752093135Kocuria rhizophila DC2201, complete genometype I restriction enzyme R protein2e-1999
NC_013799:1:1291912919160863168Hydrogenobacter thermophilus TK-6, complete genometype I restriction-modification system R subunit5e-1997.4
NC_017161:1:1298012980161473168Hydrogenobacter thermophilus TK-6 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease5e-1997.4
NC_014974:758129:7616407616407645372898Thermus scotoductus SA-01 chromosome, complete genometype I restriction-modification system subunit R6e-1893.6
NC_015676:1530000:1546589154658915497533165Methanosalsum zhilinae DSM 4017 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family8e-1893.6
NC_015847:808931:8206928206928237903099Methanococcus maripaludis XI chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease1e-1792.8
NC_017278:258921:2767242767242796422919Thermus sp. CCB_US3_UF1 chromosome, complete genomeType I site-specific deoxyribonuclease, HsdR2e-1792
NC_016047:2480921:2487836248783624910213186Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completetype I restriction-modification system, R subunit8e-1790.1
NC_015387:1091403:1101507110150711038582352Marinithermus hydrothermalis DSM 14884 chromosome, complete genome9e-1789.7
NC_017093:7255652:7267831726783172710493219Actinoplanes missouriensis 431, complete genomeputative restriction-modification system endonuclease2e-1689
NC_008344:554229:5591105591105623283219Nitrosomonas eutropha C91, complete genometype I site-specific deoxyribonuclease, HsdR family protein4e-1687.8
NC_007677:1354500:1385496138549613886453150Salinibacter ruber DSM 13855, complete genomeHsdR8e-1686.7
NC_012881:3004784:3004784300478430079153132Desulfovibrio salexigens DSM 2638, complete genometype I site-specific deoxyribonuclease, HsdR family8e-1686.7
NC_015634:3017564:3030763303076330340443282Bacillus coagulans 2-6 chromosome, complete genometype I site-specific deoxyribonuclease1e-1586.7
NC_010364:84900:9306793067960693003Halobacterium salinarum R1, complete genometype I site-specific deoxyribonuclease subunit rmeR1e-1586.3
NC_002607:81452:9063990639936413003Halobacterium sp. NRC-1, complete genomeRmeR1e-1586.3
NC_013595:8338619:8348071834807183512893219Streptosporangium roseum DSM 43021, complete genomeHsdR family type I site-specific deoxyribonuclease1e-1585.9
NC_015587:90539:99184991841023513168Hydrogenobaculum sp. SHO chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1585.5
NC_020411:90538:99183991831023503168Hydrogenobaculum sp. HO, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1585.5
NC_015557:90503:99148991481023153168Hydrogenobaculum sp. 3684 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1585.5
NC_007356:51080:9336693366963502985Dehalococcoides sp. CBDB1, complete genomerestriction enzyme type I helicase subunit2e-1585.1
NC_015966:1661329:1664443166444316676553213Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease3e-1585.1
NC_009439:608500:6175046175046207673264Pseudomonas mendocina ymp, complete genomeHsdR family type I site-specific deoxyribonuclease3e-1584.7
NC_012108:2194251:2195556219555621985733018Desulfobacterium autotrophicum HRM2, complete genomeHsdR26e-1584
NC_009524:1369395:1369395136939513727183324Psychrobacter sp. PRwf-1 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease1e-1483.2
NC_008346:2579756:2597163259716326003483186Syntrophomonas wolfei subsp. wolfei str. Goettingen, completetype I restriction-modification system, R subunit1e-1483.2
NC_016147:2337244:2345134234513423479442811Pseudoxanthomonas spadix BD-a59 chromosome, complete genomerestriction enzyme type I helicase subunits-related helicase1e-1482.8
NC_013156:728397:7283977283977314473051Methanocaldococcus fervens AG86, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1482.4
NC_014650:1893758:1912565191256519156273063Geobacillus sp. Y4.1MC1 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1482
NC_007644:1694879:1704445170444517073422898Moorella thermoacetica ATCC 39073, complete genometype I site-specific deoxyribonuclease, HsdR family3e-1481.6
NC_020210:1275031:1286489128648912895543066Geobacillus sp. GHH01, complete genomeputative type I restriction enzyme HindVIIP R protein3e-1481.6
NC_015660:1918307:1939072193907219421373066Geobacillus thermoglucosidasius C56-YS93 chromosome, completetype I site-specific deoxyribonuclease, HsdR family4e-1480.9
NC_014365:2810405:2829464282946428324182955Desulfarculus baarsii DSM 2075 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family4e-1480.9
NC_006510:1400000:1407300140730014103653066Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system specificity protein5e-1480.9
NC_007498:3399478:3413541341354134164952955Pelobacter carbinolicus DSM 2380, complete genomeR (restriction) subunit/helicase5e-1480.9
NC_010682:3313944:3322510332251033254972988Ralstonia pickettii 12J chromosome 1, complete sequencetype I site-specific deoxyribonuclease, HsdR family1e-1379.3
NC_011294:4604283:4605367460536746086333267Salmonella enterica subsp. enterica serovar Enteritidis strtype I restriction-modification system subunit R2e-1379
NC_013440:3813132:3833374383337438364123039Haliangium ochraceum DSM 14365, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1378.6
NC_005363:3562205:3573462357346235766893228Bdellovibrio bacteriovorus HD100, complete genometype I restriction-modification system restriction subunit3e-1378.6
NC_021177:3627947:3642213364221336452903078Streptomyces fulvissimus DSM 40593, complete genomeRestriction enzyme type I helicase subunits3e-1378.6
NC_011205:4761598:4762682476268247659483267Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-1378.2
NC_011884:3099488:3114437311443731175983162Cyanothece sp. PCC 7425, complete genometype I site-specific deoxyribonuclease, HsdR family4e-1377.8
NC_004369:2465461:2476654247665424798543201Corynebacterium efficiens YS-314, complete genomeputative type I restriction-modification system subunit R4e-1377.8
NC_004757:2730057:2762574276257427655733000Nitrosomonas europaea ATCC 19718, complete genomeRestriction enzyme type I helicase subunits and related helicases2e-1275.9
NC_008782:3800500:3806730380673038097323003Acidovorax sp. JS42, complete genometype I site-specific deoxyribonuclease, HsdR family1e-1275.9
NC_009778:567000:5863505863505894813132Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1275.5
NC_011886:1176238:1202179120217912054033225Arthrobacter chlorophenolicus A6, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1275.5
NC_020260:603796:6153756153756185063132Cronobacter sakazakii Sp291, complete genomehypothetical protein4e-1274.7
NC_003902:3430051:3446731344673134500213291Xanthomonas campestris pv. campestris str. ATCC 33913, completeHsdR protein4e-1274.3
NC_007086:1457531:1460771146077114640613291Xanthomonas campestris pv. campestris str. 8004, complete genomeHsdR protein4e-1274.3
NC_015562:755785:7662437662437692933051Methanotorris igneus Kol 5 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family5e-1274.3
NC_014002:1061501:1072360107236010752572898Methanohalophilus mahii DSM 5219 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family5e-1274.3
NC_002163:1471517:1479390147939014824853096Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomeputative type I restriction enzyme R protein7e-1273.9
NC_013943:2705983:2717489271748927205753087Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease9e-1273.2
NC_008705:27434:3581135811391373327Mycobacterium sp. KMS, complete genometype I site-specific deoxyribonuclease, HsdR family1e-1173.2
NC_008146:20047:2989629896332223327Mycobacterium sp. MCS, complete genometype I site-specific deoxyribonuclease, HsdR family1e-1173.2
NC_013235:1218378:1227836122783612310363201Nakamurella multipartita DSM 44233, complete genometype I site-specific deoxyribonuclease, HsdR family1e-1173.2
NC_004578:1190000:1195573119557311986953123Pseudomonas syringae pv. tomato str. DC3000, complete genometype I restriction-modification enzyme, R subunit, putative1e-1172.8
NC_007759:2097734:2118210211821021213413132Syntrophus aciditrophicus SB, complete genometype I restriction-modification system restriction subunit2e-1172.4
NC_007948:1972290:2004590200459020076943105Polaromonas sp. JS666, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1172
NC_010688:1435694:1438913143891314422033291Xanthomonas campestris pv. campestris, complete genometype I site-specific deoxyribonuclease3e-1171.6
NC_009076:75535:9256692566958353270Burkholderia pseudomallei 1106a chromosome I, complete sequencetype I site-specific deoxyribonuclease HsdR3e-1171.6
NC_004369:256262:2815552815552848543300Corynebacterium efficiens YS-314, complete genomehypothetical protein4e-1171.2
NC_007651:3064530:3147581314758131507363156Burkholderia thailandensis E264 chromosome I, complete sequencetype I restriction-modification system endonuclease4e-1171.2
NC_008609:1976403:1993572199357219966523081Pelobacter propionicus DSM 2379, complete genometype I site-specific deoxyribonuclease, HsdR family4e-1171.2
NC_007969:1664500:1665480166548016686623183Psychrobacter cryohalolentis K5, complete genometype I site-specific deoxyribonuclease, HsdR family5e-1170.9
NC_014828:501342:5111395111395141563018Ethanoligenens harbinense YUAN-3 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family8e-1170.1
NC_004463:5540924:5554605555460555578623258Bradyrhizobium japonicum USDA 110, complete genomeputative type I restriction enzyme8e-1170.1
NC_007951:4608560:4611434461143446145203087Burkholderia xenovorans LB400 chromosome 1, complete sequenceType I site-specific deoxyribonuclease HsdR9e-1170.1
NC_018012:598724:6170796170796203183240Thiocystis violascens DSM 198 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease1e-1069.7
NC_011185:37922:4789947899509853087Vibrio fischeri MJ11 plasmid pMJ100, complete sequencetype I site-specific deoxyribonuclease1e-1069.3
NC_012669:4323490:4325841432584143291343294Beutenbergia cavernae DSM 12333, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1068.9
NC_007777:4796627:4793298479329847966303333Frankia sp. CcI3, complete genometype I site-specific deoxyribonuclease, HsdR family2e-1068.9
NC_013410:1651000:1665900166590016690223123Fibrobacter succinogenes subsp. succinogenes S85 chromosome,HsdR family type I site-specific deoxyribonuclease2e-1068.9
NC_013222:817686:8330478330478360493003Robiginitalea biformata HTCC2501, complete genomeHsdR2e-1068.9
NC_007298:1418500:1419442141944214226753234Dechloromonas aromatica RCB, complete genomeType I site-specific deoxyribonuclease HsdR2e-1068.6
NC_011662:1:84868486116113126Thauera sp. MZ1T, complete genometype I site-specific deoxyribonuclease, HsdR family5e-1067.8
NC_010163:614634:6241646241646273073144Acholeplasma laidlawii PG-8A chromosome, complete genometype I site-specific restriction-modification system, R (restriction) subunit4e-1067.8
NC_015740:3631326:3636307363630736394083102Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetype I restriction-modification enzyme, R subunit6e-1067.4
NC_014165:2928464:2934819293481929380253207Thermobispora bispora DSM 43833 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease9e-1066.6
NC_014915:2427000:2441753244175324447643012Geobacillus sp. Y412MC52 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family9e-1066.6
NC_013411:284461:2947242947242977353012Geobacillus sp. Y412MC61, complete genometype I site-specific deoxyribonuclease, HsdR family9e-1066.6
NC_008786:3323167:3360938336093833641503213Verminephrobacter eiseniae EF01-2, complete genometype I site-specific deoxyribonuclease, HsdR family1e-0966.2
NC_015497:4564339:4564339456433945676383300Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family1e-0966.2
NC_012793:1718000:1718140171814017211513012Geobacillus sp. WCH70, complete genometype I site-specific deoxyribonuclease, HsdR family2e-0965.9
NC_015580:293803:2998742998743030143141Novosphingobium sp. PP1Y, complete genomeputative type I restriction-modification system HsdR1e-0965.9
NC_015177:1476073:1502540150254015056773138Pedobacter saltans DSM 12145 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family2e-0965.5
NC_018867:1407163:1439736143973614429303195Dehalobacter sp. CF chromosome, complete genomeType I restriction-modification system, restriction subunit R2e-0965.5
NC_016629:3789554:3801760380176038048223063Desulfovibrio africanus str. Walvis Bay chromosome, completeHsdR family type I site-specific deoxyribonuclease2e-0965.1
NC_008009:4421992:4435635443563544387243090Acidobacteria bacterium Ellin345, complete genometype I site-specific deoxyribonuclease, HsdR family3e-0965.1
NC_015856:1:5728572888383111Collimonas fungivorans Ter331 chromosome, complete genometype I site-specific deoxyribonuclease3e-0964.7
NC_012489:209016:2090162090162121653150Gemmatimonas aurantiaca T-27, complete genometype I restriction-modification system restriction subunit3e-0964.7
NC_015588:939037:9574719574719607673297Isoptericola variabilis 225 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family3e-0964.7
NC_015138:5342473:5346115534611553493183204Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completetype I site-specific deoxyribonuclease, HsdR family5e-0964.3
NC_008278:5399715:5419387541938754227523366Frankia alni ACN14a, complete genomeType I restriction-modification system R subunit5e-0964.3
NC_017511:884083:8962218962218992473027Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative type I restriction enzyme1e-0863.2
NC_020541:4122852:4145366414536641485813216Rhodanobacter sp. 2APBS1, complete genometype I site-specific deoxyribonuclease, HsdR family1e-0862.8
NC_011206:2369500:2379805237980523828733069Acidithiobacillus ferrooxidans ATCC 53993, complete genometype I site-specific deoxyribonuclease, HsdR family2e-0862.4
NC_012968:239476:2425242425242457453222Methylotenera mobilis JLW8, complete genometype I site-specific deoxyribonuclease, HsdR family2e-0862
NC_016613:2596464:2610213261021326134403228Vibrio sp. EJY3 chromosome 1, complete sequenceHsdR family type I site-specific deoxyribonuclease3e-0861.6
NC_002946:684728:6900606900606930863027Neisseria gonorrhoeae FA 1090, complete genomeputative type I restriction enzyme4e-0861.2
NC_010175:2488000:2497678249767825008123135Chloroflexus aurantiacus J-10-fl, complete genometype I site-specific deoxyribonuclease, HsdR family5e-0860.8
NC_011295:1263500:1270521127052112727672247Coprothermobacter proteolyticus DSM 5265, complete genometype I restriction-modification system, R subunit5e-0860.8
NC_014220:1162948:1164843116484311679953153Syntrophothermus lipocalidus DSM 12680 chromosome, complete genometype I site-specific deoxyribonuclease, HsdR family7e-0860.5
NC_010995:4338860:4344576434457643477883213Cellvibrio japonicus Ueda107, complete genomeHsdR1e-0759.7
NC_015458:2338437:2365206236520623684303225Pusillimonas sp. T7-7 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease1e-0759.7
NC_015696:285456:2978402978403009893150Francisella sp. TX077308 chromosome, complete genometype I restriction-modification system, R subunit1e-0759.3
NC_009523:341347:3564713564713595573087Roseiflexus sp. RS-1 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease2e-0758.9
NC_009801:2898426:2915437291543729186763240Escherichia coli E24377A, complete genometype I site-specific deoxyribonuclease, HsdR family2e-0758.9
NC_015578:1430112:1440645144064514438663222Treponema primitia ZAS-2 chromosome, complete genomeputatIve type i restriction enzyme hindviip r protein2e-0758.9
NC_013959:1059004:1069825106982510723682544Sideroxydans lithotrophicus ES-1 chromosome, complete genometype III restriction protein res subunit2e-0758.9
NC_009943:940835:9542409542409565912352Candidatus Desulfococcus oleovorans Hxd3, complete genomeEcoEI R domain protein3e-0758.5
NC_011035:968569:9801329801329831583027Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative type I restriction enzyme3e-0758.5
NC_009725:692237:7022167022167053683153Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein4e-0758.2
NC_021184:1024305:1026603102660310298363234Desulfotomaculum gibsoniae DSM 7213, complete genometype I site-specific deoxyribonuclease, HsdR family1e-0656.2
NC_011992:1968258:1985201198520119877682568Acidovorax ebreus TPSY, complete genometype I site-specific deoxyribonuclease, HsdR family2e-0655.8
NC_014315:1396990:1414766141476614179243159Nitrosococcus watsoni C-113 chromosome, complete genomeHsdR family type I site-specific deoxyribonuclease3e-0655.1
NC_020209:4768500:4778873477887347822173345Pseudomonas poae RE*1-1-14, complete genometype I restriction-modification system restriction subunit3e-0654.7