Pre_GI Gene

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Host: NC_014323 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014323:5051041 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
50510415052012972hypothetical protein
505200950530581050glycosyltransferaseQuickGO ontologyBLASTP
505332750546851359UDP-N-acetylglucosamine pyrophosphorylaseQuickGO ontologyBLASTP
505473550557811047alpha-D-mannose-alpha1-6phosphatidyl myo-inositol monomannoside transferaseQuickGO ontologyBLASTP
50559545056433480AsnC family transcription regulator proteinQuickGO ontologyBLASTP
505659350584101818L-glutamineD-fructose-6-phosphate aminotransferaseQuickGO ontologyBLASTP
50586255058819195
50588245059735912hypothetical proteinBLASTP
505989250624652574DNA helicaseQuickGO ontologyBLASTP
50624585063429972hypothetical proteinBLASTP
50644195064862444membrane efflux proteinQuickGO ontologyBLASTP
50648965065477582small-conductance mechanosensitive channel proteinQuickGO ontologyBLASTP
50656415066162522hypothetical protein
506615250693733222cobalt-zinc-cadmium resistance cation efflux system transmembrane proteinQuickGO ontologyBLASTP
506940350705931191cobalt-zinc-cadmium resistance cation efflux system transmembrane proteinQuickGO ontologyBLASTP
507067350719591287cobalt-zinc-cadmium resistance cation efflux system outer membrane proteinQuickGO ontologyBLASTP
50720285072381354cobalt-zinc-cadmium resistance cation efflux system precursor proteinQuickGO ontologyBLASTP
50726455073568924LysR family transcription regulator proteinQuickGO ontologyBLASTP
50738725074507636hypothetical proteinBLASTP
50746555074972318chaperonin GroESQuickGO ontologyBLASTP
507502150766431623chaperonin GroELQuickGO ontologyBLASTP