Pre_GI Gene

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Host: NC_014323 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014323:4355266 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
43552664356078813pyrroline-5-carboxylate reductaseQuickGO ontologyBLASTP
43561264356827702enzyme with a TIM-barrel fold proteinQuickGO ontologyBLASTP
435691043579651056Tfp pilus assembly protein pilus retraction ATPase PilT proteinQuickGO ontologyBLASTP
43580144358499486glutathione peroxidaseQuickGO ontologyBLASTP
435863543596511017ketol-acid reductoisomerase oxidoreductaseQuickGO ontologyBLASTP
435970143610141314sigma54-dependent transcription regulator proteinQuickGO ontologyBLASTP
43610494361951903LysR family transcription regulator proteinQuickGO ontologyBLASTP
436197343630821110hypothetical proteinBLASTP
43630094363950942hypothetical protein
436414743652351089hypothetical proteinBLASTP
436522843663101083hypothetical proteinBLASTP
436631343688142502transmembrane proteinQuickGO ontologyBLASTP
43688924369107216hypothetical protein
43690874369887801short-chain alcohol dehydrogenaseQuickGO ontologyBLASTP
436989843706687713-oxoacyl-acyl-carrier-protein reductaseQuickGO ontologyBLASTP
437078543726681884TRAP-type C4-dicarboxylate transport system dctQ-M fusion permease large permeaseQuickGO ontologyBLASTP
437282943738631035TRAP-type C4-dicarboxylate transport system periplasmic proteinQuickGO ontologyBLASTP
43738574374243387hypothetical protein
437461743757981182acetyl-CoA acetyltransferaseQuickGO ontologyBLASTP
437588343775531671long-chain-fatty-acid-CoA ligaseQuickGO ontologyBLASTP
43775804378119540hypothetical protein
43781164378574459hypothetical proteinBLASTP