Query: NC_014323:4355266 Herbaspirillum seropedicae SmR1 chromosome, complete genome
Start: 4355266, End: 4378574, Length: 23309
Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria
General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008786:1936626* | 1936626 | 1961113 | 24488 | Verminephrobacter eiseniae EF01-2, complete genome | 1e-113 | 418 | BLASTN svg | BLASTP svg |
NC_014153:2282725* | 2282725 | 2307255 | 24531 | Thiomonas intermedia K12 chromosome, complete genome | 9e-105 | 389 | BLASTN svg | BLASTP svg |
NC_020209:3797830* | 3797830 | 3820203 | 22374 | Pseudomonas poae RE*1-1-14, complete genome | 3e-83 | 317 | BLASTN svg | BLASTP svg |
NC_014323:3895376 | 3895376 | 3915228 | 19853 | Herbaspirillum seropedicae SmR1 chromosome, complete genome | 1e-36 | 163 | BLASTN svg | BLASTP svg |
NC_018681:7191008 | 7191008 | 7216713 | 25706 | Nocardia brasiliensis ATCC 700358 chromosome, complete genome | 4e-30 | 141 | BLASTN svg | BLASTP svg |
NC_011894:3161289 | 3161289 | 3204281 | 42993 | Methylobacterium nodulans ORS 2060, complete genome | 1e-26 | 129 | BLASTN svg | BLASTP svg |
NC_013855:558831* | 558831 | 581099 | 22269 | Azospirillum sp. B510 plasmid pAB510a, complete sequence | 1e-26 | 129 | BLASTN svg | BLASTP svg |
NC_008781:654289* | 654289 | 678264 | 23976 | Polaromonas naphthalenivorans CJ2, complete genome | 8e-19 | 103 | BLASTN svg | BLASTP svg |
NC_008752:261903 | 261903 | 282106 | 20204 | Acidovorax avenae subsp. citrulli AAC00-1, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_015740:2692023* | 2692023 | 2717345 | 25323 | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete | 8e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_004463:2344128 | 2344128 | 2365099 | 20972 | Bradyrhizobium japonicum USDA 110, complete genome | 8e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_021184:569653 | 569653 | 591000 | 21348 | Desulfotomaculum gibsoniae DSM 7213, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_006576:2683467 | 2683467 | 2709499 | 26033 | Synechococcus elongatus PCC 6301, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_007604:1586243* | 1586243 | 1629449 | 43207 | Synechococcus elongatus PCC 7942, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_008027:2648560* | 2648560 | 2670791 | 22232 | Pseudomonas entomophila L48, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_021150:4201965 | 4201965 | 4232321 | 30357 | Azotobacter vinelandii CA6, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_012560:4201969 | 4201969 | 4232325 | 30357 | Azotobacter vinelandii DJ, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_010623:1961685 | 1961685 | 2041599 | 79915 | Burkholderia phymatum STM815 chromosome 2, complete sequence | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_007925:4060635* | 4060635 | 4088224 | 27590 | Rhodopseudomonas palustris BisB18, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_012792:962292 | 962292 | 990683 | 28392 | Variovorax paradoxus S110 chromosome 2, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015563:4629436 | 4629436 | 4652196 | 22761 | Delftia sp. Cs1-4 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015738:1971211 | 1971211 | 1996599 | 25389 | Eggerthella sp. YY7918, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_009512:4287605* | 4287605 | 4322509 | 34905 | Pseudomonas putida F1, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013722:3081459 | 3081459 | 3106807 | 25349 | Xanthomonas albilineans, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_005125:2811986 | 2811986 | 2855352 | 43367 | Gloeobacter violaceus PCC 7421, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015740:3486226 | 3486226 | 3509099 | 22874 | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010804:831000* | 831000 | 853169 | 22170 | Burkholderia multivorans ATCC 17616 chromosome 1, complete | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_007517:1561466* | 1561466 | 1593394 | 31929 | Geobacter metallireducens GS-15, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_007516:774489* | 774489 | 816164 | 41676 | Synechococcus sp. CC9605, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |