Pre_GI Gene

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Host: NC_014323 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014323:3895376 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
389537638965961221sugar ABC transporter ATPaseQuickGO ontologyBLASTP
38965323897413882AraC family transcription regulator proteinQuickGO ontologyBLASTP
389744338989241482D-xylulose kinaseQuickGO ontologyBLASTP
38990063899185180hypothetical protein
389925839017472490hypothetical proteinBLASTP
390176239028381077hypothetical proteinBLASTP
390284839038851038hypothetical proteinBLASTP
39039583904119162hypothetical protein
390430239067762475VGR-related proteinQuickGO ontologyBLASTP
39069563907687732hypothetical proteinBLASTP
390768439101972514transmembrane proteinQuickGO ontologyBLASTP
391020139112771077hypothetical proteinBLASTP
391133739124131077hypothetical proteinBLASTP
39131043913505402hypothetical proteinBLASTP
39135153913778264hypothetical proteinBLASTP
391381939152281410hypothetical proteinBLASTP