Pre_GI: BLASTN Hits

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Query: NC_014323:3895376 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 3895376, End: 3915228, Length: 19853

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014323:43552664355266437857423309Herbaspirillum seropedicae SmR1 chromosome, complete genome2e-34155BLASTN svgBLASTP svg
NC_014370:88593788593794922363287Prevotella melaninogenica ATCC 25845 chromosome chromosome I,2e-1385.7BLASTN svgBLASTP svg
NC_003063:20593112059311208899929689Agrobacterium tumefaciens str. C58 chromosome linear, complete4e-1177.8BLASTN svgBLASTP svg
NC_013510:517878*51787856251444637Thermomonospora curvata DSM 43183, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_003305:112033020330Agrobacterium tumefaciens str. C58 chromosome linear, complete4e-1177.8BLASTN svgBLASTP svg
NC_012880:2399205*2399205242050221298Dickeya dadantii Ech703, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014165:25330402533040256380530766Thermobispora bispora DSM 43833 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015856:3536441*3536441356339226952Collimonas fungivorans Ter331 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_016048:184500*18450023109946600Oscillibacter valericigenes Sjm18-20, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_019973:2417000*2417000243959922600Mesorhizobium australicum WSM2073, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_010725:52172605217260524017722918Methylobacterium populi BJ001, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_012724:19147401914740194049525756Burkholderia glumae BGR1 chromosome 1, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_012808:420334*42033444610925776Methylobacterium extorquens AM1, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_014363:16805781680578170738226805Olsenella uli DSM 7084 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_018750:4311300*4311300432914617847Streptomyces venezuelae ATCC 10712, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007760:47510004751000477056419565Anaeromyxobacter dehalogenans 2CP-C, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012560:32009613200961322539624436Azotobacter vinelandii DJ, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013202:906044*90604493762031577Halomicrobium mukohataei DSM 12286, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015740:36783423678342371659938258Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete4e-0867.9BLASTN svgBLASTP svg
NC_021150:32009593200959322539424436Azotobacter vinelandii CA6, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008027:2051821*2051821207333821518Pseudomonas entomophila L48, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_008027:55764585576458559851822061Pseudomonas entomophila L48, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_011769:78749678749681183124336Desulfovibrio vulgaris str. 'Miyazaki F', complete genome1e-0765.9BLASTN svgBLASTP svg
NC_011894:2747491*2747491277359926109Methylobacterium nodulans ORS 2060, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010172:632180*63218065846326284Methylobacterium extorquens PA1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_011071:18775001877500190261425115Stenotrophomonas maltophilia R551-3, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_011145:47975484797548481912621579Anaeromyxobacter sp. K, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_011757:577611*57761160454026930Methylobacterium chloromethanicum CM4, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013169:21045972104597212575721161Kytococcus sedentarius DSM 20547, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_013446:4723380*4723380475330129922Comamonas testosteroni CNB-2, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_019897:739577395712749553539Thermobacillus composti KWC4 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_005773:5149768*5149768521141661649Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008391:24044432404443242322518783Burkholderia cepacia AMMD chromosome 2, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_012856:15859891585989160425818270Ralstonia pickettii 12D chromosome 1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014217:45505444550544458915738614Starkeya novella DSM 506 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014837:33014*330146044127428Pantoea sp. At-9b chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014844:659829*65982970618546357Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014923:2439197*2439197246272623530Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete2e-0661.9BLASTN svgBLASTP svg
NC_015675:2567000*2567000258988822889Mesorhizobium opportunistum WSM2075 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015856:29338293384929919962Collimonas fungivorans Ter331 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015976:2900891*2900891292514524255Sphingobium sp. SYK-6, complete genome9e-0660BLASTN svgBLASTP svg
NC_015856:1271295*1271295129109919805Collimonas fungivorans Ter331 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_015563:6167512*6167512618907121560Delftia sp. Cs1-4 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_014532:17139871713987173773623750Halomonas elongata DSM 2581, complete genome9e-0660BLASTN svgBLASTP svg
NC_012791:40790624079062410253023469Variovorax paradoxus S110 chromosome 1, complete genome9e-0660BLASTN svgBLASTP svg