Pre_GI Gene

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Host: NC_014323 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014323:292958 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2929582939741017LacI family transcription regulator proteinQuickGO ontologyBLASTP
293971294603633transcription regulator proteinQuickGO ontologyBLASTP
2948132960301218major facilitator superfamily permeaseQuickGO ontologyBLASTP
2961502988882739VGR-related proteinQuickGO ontologyBLASTP
2989033010382136transmembrane proteinQuickGO ontologyBLASTP
3010383025281491transmembrane proteinQuickGO ontologyBLASTP
3025883039401353transmembrane proteinQuickGO ontologyBLASTP
303975304238264hypothetical proteinBLASTP
3043333054091077diguanylate cyclaseQuickGO ontologyBLASTP
305939306388450hypothetical protein
3064463068053605-carboxymethyl-2-hydroxymuconate delta-isomeraseQuickGO ontologyBLASTP
306899307879981threonine dehydrataseQuickGO ontologyBLASTP
307957308613657hypothetical proteinBLASTP
3087233099731251phospholipase D transphosphatidylaseQuickGO ontologyBLASTP
310004310630627MotATolQExbB proton channel family proteinQuickGO ontologyBLASTP
3106953131182424TonB-dependent receptor proteinQuickGO ontologyBLASTP