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Query: NC_014323:292958 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 292958, End: 313118, Length: 20161

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015563:5162177*5162177518611723941Delftia sp. Cs1-4 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_005125:40620254062025408159919575Gloeobacter violaceus PCC 7421, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_008752:16687716687718811421238Acidovorax avenae subsp. citrulli AAC00-1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007511:1681764*1681764170409922336Burkholderia sp. 383 chromosome 2, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_020211:379000*37900040159422595Serratia marcescens WW4, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013739:717352*71735274820730856Conexibacter woesei DSM 14684, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_003295:34215203421520348536463845Ralstonia solanacearum GMI1000, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014153:21255512125551214991124361Thiomonas intermedia K12 chromosome, complete genome9e-0660BLASTN svgBLASTP svg