Pre_GI Gene

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Host: NC_014323 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014323:2680085 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
268008526822022118TonB-dependent receptor proteinQuickGO ontologyBLASTP
268228126836121332L-ornithine N5-monooxygenaseQuickGO ontologyBLASTP
268363426846381005acetyltransferase-like proteinQuickGO ontologyBLASTP
26847442685556813iron reductaseQuickGO ontologyBLASTP
268572026874021683siderophore cyclic peptide ABC transporter proteinQuickGO ontologyBLASTP
26880212688299279hypothetical proteinBLASTP
26885942689346753hypothetical protein
26894262690178753hypothetical proteinBLASTP
269024626912951050hypothetical proteinBLASTP
26912952691813519hypothetical protein
26920372692273237hypothetical protein
26923172692628312phage proteinQuickGO ontologyBLASTP
26927592693079321hypothetical protein
26930542693557504hypothetical protein
269359026953681779bacteriophage replication proteinQuickGO ontologyBLASTP
26954982695845348hypothetical protein
26959322696252321hypothetical protein
26962602696646387hypothetical protein
26967262697343618hypothetical proteinBLASTP
26974372697571135hypothetical protein
26978232698671849hypothetical proteinBLASTP
26988182699477660hypothetical protein
26995852700037453hypothetical protein
27000342700816783hypothetical proteinBLASTP
27008192701415597soluble lytic murein transglycosylaseQuickGO ontologyBLASTP
27014122701741330hypothetical protein
27017342702021288hypothetical protein
27024532702734282hypothetical protein
27027392703092354hypothetical protein
27035252703884360hypothetical proteinBLASTP
27041652704515351hypothetical proteinBLASTP
270461127071722562cation transport ATPaseQuickGO ontologyBLASTP
27075722708147576hypothetical protein
27082162708902687hypothetical proteinBLASTP
270913127102581128AraC family transcription regulator proteinQuickGO ontologyBLASTP
27104552710649195hypothetical protein
27106702711488819CrpFnr family transcription regulatorQuickGO ontologyBLASTP
271151127143092799acyltransferase family proteinQuickGO ontologyBLASTP
271453927163201782DNA polymerase IV proteinQuickGO ontologyBLASTP
271630227185062205cation transport P-type ATPaseQuickGO ontologyBLASTP
27187342718997264hypothetical protein
27189972719719723export system ATP-binding subunitQuickGO ontologyBLASTP
271971627208041089export system membrane fusion proteinQuickGO ontology
272080127222701470ABC-type export system outer membrane channel proteinQuickGO ontologyBLASTP
272227727234311155antimicrobial peptide ABC transporter permeaseQuickGO ontologyBLASTP
27234602723942483flavodoxin proteinQuickGO ontologyBLASTP
27239622724171210hypothetical proteinBLASTP