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Query: NC_014323:2680085 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 2680085, End: 2724171, Length: 44087

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015138:41034574103457412794224486Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-51212BLASTN svgBLASTP svg
NC_008752:4086283*4086283411381327531Acidovorax avenae subsp. citrulli AAC00-1, complete genome8e-45190BLASTN svgBLASTP svg
NC_009512:22384372238437226259924163Pseudomonas putida F1, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_015711:71919687191968721357621609Myxococcus fulvus HW-1 chromosome, complete genome4e-1695.6BLASTN svgBLASTP svg
NC_020388:48680348680351020323401Natronomonas moolapensis 8.8.11 complete genome2e-1179.8BLASTN svgBLASTP svg
NC_009138:15448351544835157592231088Herminiimonas arsenicoxydans, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_011983:50828750828752844920163Agrobacterium radiobacter K84 chromosome 2, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_009051:2097271*2097271212680329533Methanoculleus marisnigri JR1, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_014323:3669704*3669704369236322660Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_006361:5146000*5146000517359927600Nocardia farcinica IFM 10152, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_012724:19147401914740194049525756Burkholderia glumae BGR1 chromosome 1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_009921:3551036*3551036362235971324Frankia sp. EAN1pec, complete genome5e-0661.9BLASTN svgBLASTP svg