Query: NC_014323:2680085 Herbaspirillum seropedicae SmR1 chromosome, complete genome
Start: 2680085, End: 2724171, Length: 44087
Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria
General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015138:4103457 | 4103457 | 4127942 | 24486 | Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete | 2e-51 | 212 | BLASTN svg | BLASTP svg |
NC_008752:4086283* | 4086283 | 4113813 | 27531 | Acidovorax avenae subsp. citrulli AAC00-1, complete genome | 8e-45 | 190 | BLASTN svg | BLASTP svg |
NC_009512:2238437 | 2238437 | 2262599 | 24163 | Pseudomonas putida F1, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_015711:7191968 | 7191968 | 7213576 | 21609 | Myxococcus fulvus HW-1 chromosome, complete genome | 4e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_020388:486803 | 486803 | 510203 | 23401 | Natronomonas moolapensis 8.8.11 complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_009138:1544835 | 1544835 | 1575922 | 31088 | Herminiimonas arsenicoxydans, complete genome | 3e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_011983:508287 | 508287 | 528449 | 20163 | Agrobacterium radiobacter K84 chromosome 2, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_009051:2097271* | 2097271 | 2126803 | 29533 | Methanoculleus marisnigri JR1, complete genome | 8e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_014323:3669704* | 3669704 | 3692363 | 22660 | Herbaspirillum seropedicae SmR1 chromosome, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_006361:5146000* | 5146000 | 5173599 | 27600 | Nocardia farcinica IFM 10152, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_012724:1914740 | 1914740 | 1940495 | 25756 | Burkholderia glumae BGR1 chromosome 1, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_009921:3551036* | 3551036 | 3622359 | 71324 | Frankia sp. EAN1pec, complete genome | 5e-06 | 61.9 | BLASTN svg | BLASTP svg |