Pre_GI Gene

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Host: NC_014323 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014323:245979 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
245979246788810amino acid ABC transportersignal transduction system periplasmic binding proteinQuickGO ontologyBLASTP
246845247573729amino acid ABC transporter ATPaseQuickGO ontologyBLASTP
247557248204648amino acid ABC transporter permeaseQuickGO ontologyBLASTP
248217248900684amino acid ABC transporter permeaseQuickGO ontologyBLASTP
2489332501741242FMN-dependent L-lactate dehydrogenaseQuickGO ontologyBLASTP
250336251085750GntR family transcription regulator proteinQuickGO ontologyBLASTP
2510822526351554TPR repeat containing SEL1 subfamilyQuickGO ontologyBLASTP
252738253406669phosphatidylserinephosphatidylglycerophosphate cardiolipin synthaseQuickGO ontologyBLASTP
2534372549931557TPR repeat containing SEL1 subfamilyQuickGO ontologyBLASTP
2550992570301932phospholipaseQuickGO ontologyBLASTP
2570572599572901VGR-related proteinQuickGO ontologyBLASTP
260128260502375heat shock protein 15QuickGO ontologyBLASTP
260596261060465hypothetical proteinBLASTP
261271261972702transcription regulator proteinQuickGO ontologyBLASTP
2619912637811791acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
26397526639224183-hydroxyacyl-CoA dehydrogenase oxidoreductaseQuickGO ontologyBLASTP
2664422676381197acetyl-CoA acyltransferaseQuickGO ontologyBLASTP