Pre_GI: BLASTN Hits

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Query: NC_014323:245979 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 245979, End: 267638, Length: 21660

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015856:63335363335365700023648Collimonas fungivorans Ter331 chromosome, complete genome01281BLASTN svgBLASTP svg
NC_013446:4723380*4723380475330129922Comamonas testosteroni CNB-2, complete genome2e-105391BLASTN svgBLASTP svg
NC_008781:36889653688965371374824784Polaromonas naphthalenivorans CJ2, complete genome5e-60240BLASTN svgBLASTP svg
NC_016002:3077648*3077648310047122824Pseudogulbenkiania sp. NH8B, complete genome2e-47198BLASTN svgBLASTP svg
NC_011958:92378992378995236428576Rhodobacter sphaeroides KD131 chromosome 2, complete genome2e-19105BLASTN svgBLASTP svg
NC_007494:86790186790189976631866Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence5e-1797.6BLASTN svgBLASTP svg
NC_014532:1307983*1307983133509927117Halomonas elongata DSM 2581, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015856:29338293384929919962Collimonas fungivorans Ter331 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014306:4106569*4106569413417327605Erwinia billingiae Eb661, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008278:25943872594387261362919243Frankia alni ACN14a, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013854:3200912*3200912322443023519Azospirillum sp. B510, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_003296:55683655683661181954984Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete4e-1177.8BLASTN svgBLASTP svg
NC_007963:31137393113739313569421956Chromohalobacter salexigens DSM 3043, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007645:16988031698803173126032458Hahella chejuensis KCTC 2396, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002927:2636694*2636694265936422671Bordetella bronchiseptica RB50, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008313:88624888624891786931622Ralstonia eutropha H16 chromosome 1, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_008314:1465643*1465643151598150339Ralstonia eutropha H16 chromosome 2, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_009439:4661102*4661102468191020809Pseudomonas mendocina ymp, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_016024:1764516*1764516180484640331Candidatus Chloracidobacterium thermophilum B chromosome chromosome1e-0869.9BLASTN svgBLASTP svg
NC_008435:1215437*1215437131209196655Rhodopseudomonas palustris BisA53, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012791:40790624079062410253023469Variovorax paradoxus S110 chromosome 1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002929:52500*525008147528976Bordetella pertussis Tohama I, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008313:21423972142397216633723941Ralstonia eutropha H16 chromosome 1, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_013204:23714992371499240814536647Eggerthella lenta DSM 2243, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013194:27882992788299281220223904Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete3e-0661.9BLASTN svgBLASTP svg
NC_012856:112296322963Ralstonia pickettii 12D chromosome 1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009075:922109221012709934890Burkholderia pseudomallei 668 chromosome II, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_004129:4093610*4093610411954425935Pseudomonas fluorescens Pf-5, complete genome3e-0661.9BLASTN svgBLASTP svg