Query: NC_014323:245979 Herbaspirillum seropedicae SmR1 chromosome, complete genome
Start: 245979, End: 267638, Length: 21660
Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria
General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015856:633353 | 633353 | 657000 | 23648 | Collimonas fungivorans Ter331 chromosome, complete genome | 0 | 1281 | BLASTN svg | BLASTP svg |
NC_013446:4723380* | 4723380 | 4753301 | 29922 | Comamonas testosteroni CNB-2, complete genome | 2e-105 | 391 | BLASTN svg | BLASTP svg |
NC_008781:3688965 | 3688965 | 3713748 | 24784 | Polaromonas naphthalenivorans CJ2, complete genome | 5e-60 | 240 | BLASTN svg | BLASTP svg |
NC_016002:3077648* | 3077648 | 3100471 | 22824 | Pseudogulbenkiania sp. NH8B, complete genome | 2e-47 | 198 | BLASTN svg | BLASTP svg |
NC_011958:923789 | 923789 | 952364 | 28576 | Rhodobacter sphaeroides KD131 chromosome 2, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_007494:867901 | 867901 | 899766 | 31866 | Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_014532:1307983* | 1307983 | 1335099 | 27117 | Halomonas elongata DSM 2581, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_015856:29338 | 29338 | 49299 | 19962 | Collimonas fungivorans Ter331 chromosome, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_014306:4106569* | 4106569 | 4134173 | 27605 | Erwinia billingiae Eb661, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_008278:2594387 | 2594387 | 2613629 | 19243 | Frankia alni ACN14a, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_013854:3200912* | 3200912 | 3224430 | 23519 | Azospirillum sp. B510, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_003296:556836 | 556836 | 611819 | 54984 | Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_007963:3113739 | 3113739 | 3135694 | 21956 | Chromohalobacter salexigens DSM 3043, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_007645:1698803 | 1698803 | 1731260 | 32458 | Hahella chejuensis KCTC 2396, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_002927:2636694* | 2636694 | 2659364 | 22671 | Bordetella bronchiseptica RB50, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_008313:886248 | 886248 | 917869 | 31622 | Ralstonia eutropha H16 chromosome 1, complete sequence | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_008314:1465643* | 1465643 | 1515981 | 50339 | Ralstonia eutropha H16 chromosome 2, complete sequence | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_009439:4661102* | 4661102 | 4681910 | 20809 | Pseudomonas mendocina ymp, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_016024:1764516* | 1764516 | 1804846 | 40331 | Candidatus Chloracidobacterium thermophilum B chromosome chromosome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_008435:1215437* | 1215437 | 1312091 | 96655 | Rhodopseudomonas palustris BisA53, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_012791:4079062 | 4079062 | 4102530 | 23469 | Variovorax paradoxus S110 chromosome 1, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_002929:52500* | 52500 | 81475 | 28976 | Bordetella pertussis Tohama I, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008313:2142397 | 2142397 | 2166337 | 23941 | Ralstonia eutropha H16 chromosome 1, complete sequence | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_013204:2371499 | 2371499 | 2408145 | 36647 | Eggerthella lenta DSM 2243, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_013194:2788299 | 2788299 | 2812202 | 23904 | Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_012856:1 | 1 | 22963 | 22963 | Ralstonia pickettii 12D chromosome 1, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_009075:92210 | 92210 | 127099 | 34890 | Burkholderia pseudomallei 668 chromosome II, complete sequence | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_004129:4093610* | 4093610 | 4119544 | 25935 | Pseudomonas fluorescens Pf-5, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |