Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:5927935 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
59279355928609675MarR family transcriptional regulatorQuickGO ontologyBLASTP
59287625929232471stress response proteinQuickGO ontologyBLASTP
592939959305771179serine hydrolaseQuickGO ontologyBLASTP
59308345931166333hypothetical protein
59313695931893525hypothetical protein
59318875932360474lipoproteinQuickGO ontology
59329655933384420hypothetical protein
59336165933741126hypothetical proteinBLASTP
593376459352151452transposaseQuickGO ontologyBLASTP
59352785936138861hypothetical proteinBLASTP
593630059376701371BLASTP
59379545938151198hypothetical proteinBLASTP
593814859394581311FtsKSpoIIIE family proteinQuickGO ontologyBLASTP
59394555939832378regulatory proteinQuickGO ontologyBLASTP
59400015940780780GntR family transcriptional regulatorQuickGO ontologyBLASTP
59411915941499309hypothetical proteinBLASTP
59418185942336519hypothetical proteinBLASTP
594258259439581377hypothetical proteinBLASTP
59439625944876915detoxifying phosphotransferaseQuickGO ontologyBLASTP
59450745945934861hypothetical proteinBLASTP
594611359471741062hypothetical protein
59472505947597348regulatory proteinQuickGO ontologyBLASTP
59476375947999363hypothetical protein