Pre_GI: BLASTP Hits

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Query: NC_013929:5927935:5939455 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 5939455, End: 5939832, Length: 378

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003888:4314389:432852143285214328871351Streptomyces coelicolor A3(2), complete genomeregulatory protein3e-47186
NC_015957:1070500:107537010753701075732363Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein8e-38155
NC_016582:5393568:540606854060685406421354Streptomyces bingchenggensis BCW-1 chromosome, complete genomeregulatory protein2e-36150
NC_013510:5115500:513536151353615135750390Thermomonospora curvata DSM 43183, complete genomehypothetical protein9e-1475.5
NC_014165:92500:100841100841101176336Thermobispora bispora DSM 43833 chromosome, complete genomehypothetical protein5e-1269.7
NC_007777:4016000:402857940285794028914336Frankia sp. CcI3, complete genomeputative regulatory protein1e-0755.5
NC_013595:9547254:956095695609569561309354Streptosporangium roseum DSM 43021, complete genomehypothetical protein2e-0754.7
NC_014210:723719:734254734254734586333Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,hypothetical protein1e-0652
NC_008278:3169500:317740131774013177712312Frankia alni ACN14a, complete genomeputative regulatory protein2e-0651.6
NC_013235:682902:696975696975697313339Nakamurella multipartita DSM 44233, complete genomehypothetical protein5e-0650.1