Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:1670402 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
167040216720331632transmembrane efflux proteinQuickGO ontologyBLASTP
16722551672749495dioxygenaseQuickGO ontologyBLASTP
1672755167444316893-3-hydroxyphenylpropionate hydroxylaseQuickGO ontologyBLASTP
16744401675282843hydrolaseQuickGO ontologyBLASTP
16753631676148786transcriptional regulatorQuickGO ontologyBLASTP
167664816781711524dioxygenaseQuickGO ontologyBLASTP
16781781678555378hypothetical proteinBLASTP
167864916799051257hypothetical proteinBLASTP
168008116815261446GntR family transcriptional regulatorQuickGO ontologyBLASTP
16817001682524825hypothetical proteinBLASTP
168255916838631305oxidoreductaseQuickGO ontologyBLASTP
16838821684682801short chain dehydrogenasereductaseQuickGO ontologyBLASTP
16848631685231369oxidoreductaseQuickGO ontologyBLASTP
168524516867621518aldehyde dehydrogenaseQuickGO ontologyBLASTP
168720416884241221efflux proteinQuickGO ontology
168848116896951215DNA-binding proteinQuickGO ontologyBLASTP
168977316907891017hypothetical proteinBLASTP