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Query: NC_013929:1670402 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 1670402, End: 1690789, Length: 20388

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013131:74378317437831745730019470Catenulispora acidiphila DSM 44928, complete genome3e-24121BLASTN svgBLASTP svg
NC_004369:3027539*3027539305195324415Corynebacterium efficiens YS-314, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010512:110932*11093213790426973Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence2e-0661.9BLASTN svgBLASTP svg