Pre_GI Gene

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Host: NC_013061 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013061:4988500 Pedobacter heparinus DSM 2366, complete genome

Host Lineage: Pedobacter heparinus; Pedobacter; Sphingobacteriaceae; Sphingobacteriales; Bacteroidetes; Bacteria

General Information: Isolation: Soil; Temp: Mesophile; Temp: 25 - 30C; Habitat: Soil. Formerly Sphingobacterium heparinum this organism was isolated from soil. This organism is able to degrade heparin and heparan sulfate glycosaminoglycans, which are components of extracellular polysaccharides and the cell surface.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
49886394989385747regulatory protein DeoRQuickGO ontologyBLASTP
49894674990453987hypothetical proteinBLASTP
49905004991297798hypothetical protein
499130949929281620hypothetical proteinBLASTP
499294149960243084TonB-dependent receptor plugQuickGO ontologyBLASTP
49963654997111747regulatory protein DeoRQuickGO ontologyBLASTP
49971674997775609hypothetical protein
499779249990031212hypothetical protein
49990034999359357hypothetical protein
499946750013021836hypothetical proteinBLASTP
50016045002362759regulatory protein LuxRQuickGO ontologyBLASTP
500247050043081839RagBSusD domain proteinQuickGO ontologyBLASTP
500432050077393420TonB-dependent receptor plugQuickGO ontologyBLASTP
50079865008732747regulatory protein DeoRQuickGO ontologyBLASTP
500877050099691200protein of unknown function UPF0075QuickGO ontologyBLASTP