Pre_GI: BLASTP Hits

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Query: NC_013061:4988500:5001604 Pedobacter heparinus DSM 2366, complete genome

Start: 5001604, End: 5002362, Length: 759

Host Lineage: Pedobacter heparinus; Pedobacter; Sphingobacteriaceae; Sphingobacteriales; Bacteroidetes; Bacteria

General Information: Isolation: Soil; Temp: Mesophile; Temp: 25 - 30C; Habitat: Soil. Formerly Sphingobacterium heparinum this organism was isolated from soil. This organism is able to degrade heparin and heparan sulfate glycosaminoglycans, which are components of extracellular polysaccharides and the cell surface.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009614:915605:917614917614918384771Bacteroides vulgatus ATCC 8482 chromosome, complete genometranscriptional regulator1e-0963.5
NC_020157:36234:528015280153496696Anabaena cylindrica PCC 7122 plasmid pANACY.02, complete sequencetwo component transcriptional regulator, LuxR family7e-0960.8
NC_004461:2002000:200398020039802004636657Staphylococcus epidermidis ATCC 12228, complete genomeresponse regulators of two-component regulatory1e-0757
NC_003923:2460130:246112824611282461781654Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein2e-0756.6
NC_002758:2515310:251873925187392519392654Staphylococcus aureus subsp. aureus Mu50, complete genomeresponse regulators of two-component regulatory2e-0756.6
NC_007793:2510801:251179925117992512452654Staphylococcus aureus subsp. aureus USA300, complete genometranscriptional regulator, DegU family2e-0756.6
NC_002953:2435667:244029424402942440947654Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative response regulator2e-0756.6
NC_002951:2448000:244823224482322448885654Staphylococcus aureus subsp. aureus COL, complete genometranscriptional regulatory protein DegU, putative2e-0756.6
NC_017342:857630:875234875234875836603Staphylococcus aureus subsp. aureus TCH60 chromosome, completeLuxR family DNA-binding response regulator2e-0756.6
NC_017338:2456000:245638824563882457041654Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeLuxR family two component transcriptional regulator2e-0756.6
NC_017337:2478877:248076724807672481369603Staphylococcus aureus subsp. aureus ED133 chromosome, completetwo-component response regulator2e-0756.6
NC_016928:2411486:241248424124842413086603Staphylococcus aureus subsp. aureus M013 chromosome, completetwo-component response regulator2e-0756.6
NC_007622:2399347:240034424003442400997654Staphylococcus aureus RF122, complete genometwo-component response regulator2e-0756.6
NC_002952:2550500:255266825526682553321654Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative response regulator2e-0756.6
NC_009782:2519379:252037725203772521030654Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein2e-0756.6
NC_002745:2446722:244772024477202448373654Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein2e-0756.6
NC_016941:2395502:239731123973112397964654Staphylococcus aureus subsp. aureus MSHR1132, complete genomeoxygen regulatory protein NreC1e-0756.6
NC_017351:2489460:249105724910572491659603Staphylococcus aureus subsp. aureus 11819-97 chromosome, completeoxygen regulatory protein nreC2e-0756.6
NC_017347:2511783:251278125127812513383603Staphylococcus aureus subsp. aureus T0131 chromosome, completeOxygen regulatory protein nreC2e-0756.6
NC_017343:2367177:237060623706062371208603Staphylococcus aureus subsp. aureus ECT-R 2, complete genometranscriptional regulatory protein degU (Protease production enhancerprotein)2e-0756.6
NC_017341:2544327:254532525453252545927603Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,LuxR family two component transcriptional regulator2e-0756.6
NC_013450:2463271:246426924642692464871603Staphylococcus aureus subsp. aureus ED98, complete genometranscriptional regulatory protein DegU, putative2e-0756.6
NC_007795:2455468:245889824588982459500603Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehypothetical protein2e-0756.6
NC_016912:2329113:233011123301112330764654Staphylococcus aureus subsp. aureus VC40 chromosome, completeDegU family transcriptional regulator2e-0756.6
NC_009641:2513300:251673025167302517383654Staphylococcus aureus subsp. aureus str. Newman chromosome,transcriptional regulator DegU family protein2e-0756.6
NC_009632:2545419:254884825488482549501654Staphylococcus aureus subsp. aureus JH1 chromosome, completeresponse regulator receiver2e-0756.6
NC_010079:2510951:251194925119492512602654Staphylococcus aureus subsp. aureus USA300_TCH1516, completetranscriptional regulator2e-0756.6
NC_017353:646195:661369661369662022654Staphylococcus lugdunensis N920143, complete genomeputative response regulator2e-0756.2
NC_007644:3229:247052470525370666Moorella thermoacetica ATCC 39073, complete genometwo component transcriptional regulator, LuxR family3e-0755.8
NC_013037:2043921:206658620665862067209624Dyadobacter fermentans DSM 18053, complete genometwo component transcriptional regulator, LuxR family3e-0755.8
NC_007168:665284:682342682342682995654Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein3e-0755.5
NC_014393:3979350:3994366399436639967832418Clostridium cellulovorans 743B chromosome, complete genomeATP-dependent transcriptional regulator, MalT-like, LuxR family8e-0754.3
NC_014215:1929000:193663719366371937302666Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Two-component system response regulator1e-0653.9
NC_016609:7565483:756548375654837566118636Niastella koreensis GR20-10 chromosome, complete genometwo component transcriptional regulator, LuxR family1e-0653.5
NC_009481:845500:851679851679852362684Synechococcus sp. WH 7803 chromosome, complete genometwo component system response regulator1e-0653.5
NC_015953:4746983:477037547703754771031657Streptomyces sp. SirexAA-E chromosome, complete genomeLuxR family two component transcriptional regulator2e-0653.1
NC_013216:3473119:347411534741153474789675Desulfotomaculum acetoxidans DSM 771, complete genometranscriptional regulator, LuxR family2e-0652.8
NC_009615:1446132:145086414508641451193330Parabacteroides distasonis ATCC 8503 chromosome, complete genometranscriptional regulator3e-0652.4
NC_008278:1876435:187968118796811880322642Frankia alni ACN14a, complete genomePutative two-component system response regulator3e-0652.4
NC_007335:1474455:148671214867121486987276Prochlorococcus marinus str. NATL2A, complete genomeregulatory protein, LuxR4e-0652
NC_013947:656140:678880678880679542663Stackebrandtia nassauensis DSM 44728 chromosome, complete genometwo component transcriptional regulator, LuxR family4e-0652
NC_009434:3413461:3415410341541034180282619Pseudomonas stutzeri A1501, complete genometranscriptional regulator4e-0652
NC_013216:3473119:347622334762233476894672Desulfotomaculum acetoxidans DSM 771, complete genometwo component transcriptional regulator, LuxR family4e-0652
NC_008819:199760:212018212018212290273Prochlorococcus marinus str. NATL1A, complete genomeBacterial regulatory protein, LuxR family5e-0651.6
NC_013501:1140390:115172711517271152362636Rhodothermus marinus DSM 4252, complete genometwo component transcriptional regulator, LuxR family6e-0651.2
NC_005042:165530:177893177893178174282Prochlorococcus marinus subsp. marinus str. CCMP1375, completeTranscriptional regulator, contains HTH motif6e-0651.2
NC_014206:771765:7762867762867777881503Geobacillus sp. C56-T3 chromosome, complete genomeLuxR family transcriptional regulator8e-0651.2
NC_013411:735838:7403217403217418231503Geobacillus sp. Y412MC61, complete genometranscriptional regulator, LuxR family8e-0651.2
NC_014915:2847680:2860734286073428622361503Geobacillus sp. Y412MC52 chromosome, complete genometranscriptional regulator, LuxR family8e-0651.2