Pre_GI Gene

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Host: NC_013008 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013008:4643825 Escherichia coli O157:H7 str. TW14359 chromosome, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli O157:H7 str. TW14359 was isolated from spinach during the E. coli outbreak in 2006. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
46438254644022198hypothetical proteinBLASTP
46449644645065102hypothetical protein
46452254645605381transposase ISEc8QuickGO ontologyBLASTP
46456024645949348transposaseQuickGO ontologyBLASTP
464599946475371539transposase ISEc8QuickGO ontologyBLASTP
46479774648096120hypothetical proteinBLASTP
46484024649148747LEE-encoded type III effectorQuickGO ontologyBLASTP
46492334649511279LEE-encoded type III secretion system factorQuickGO ontologyBLASTP
46495174649738222LEE-encoded type III secretion system componentQuickGO ontologyBLASTP
46497744650181408chaperoneQuickGO ontologyBLASTP
46501884651126939hypothetical protein EspBQuickGO ontologyBLASTP
465114746522711125hypothetical protein EspDQuickGO ontologyBLASTP
46522844652862579hypothetical protein EspAQuickGO ontologyBLASTP
465292146539761056LEE-encoded type III secretion system componentQuickGO ontologyBLASTP
465411946553391221LEE-encoded type III secretion system componentQuickGO ontologyBLASTP
465560346584072805intimin adherence proteinQuickGO ontologyBLASTP
46584674658937471molecular chaperoneQuickGO ontologyBLASTP
465907546607511677translocated intimin receptor proteinQuickGO ontologyBLASTP
46611754661786612type III effector proteinQuickGO ontologyBLASTP
46620524662435384chaperone for type III secretion of EspFQuickGO ontologyBLASTP
46626334663139507LEE-encoded type III effectorQuickGO ontologyBLASTP
46631704664087918LEE-encoded type III secretion system factorQuickGO ontologyBLASTP
46640504664466417LEE-encoded type III secretion system factorQuickGO ontologyBLASTP
46644594664836378LEE-encoded type III secretion system factorQuickGO ontologyBLASTP
466483946661791341LEE-encoded type III secretion system factorQuickGO ontologyBLASTP
466616346681902028LEE-encoded type III secretion system factorQuickGO ontologyBLASTP
46681874668540354LEE-encoded type III secretion system factorQuickGO ontologyBLASTP
46687254669024300translocated effector proteinQuickGO ontologyBLASTP
46690574669485429LEE-encoded type III secretion system componentQuickGO ontologyBLASTP
46694884670060573LEE-encoded type III secretion system factorQuickGO ontologyBLASTP
46700664670521456LEE-encoded type III secretion system componentQuickGO ontologyBLASTP
467052146720591539type III needle complex subunitQuickGO ontologyBLASTP
46720734672528456LEE-encoded type III secretion system factorQuickGO ontologyBLASTP
46729124673325414LEE-encoded positive regulator of transcriptionQuickGO ontologyBLASTP
46733804673751372negative regulator GrlRQuickGO ontologyBLASTP
46739474674405459lytic transglycosylaseQuickGO ontologyBLASTP
467440246754391038secretion system apparatus protein SsaUQuickGO ontologyBLASTP
46754324676208777LEE-encoded type III secretion system factorQuickGO ontologyBLASTP
46762084676477270LEE-encoded type III secretion system factorQuickGO ontologyBLASTP
46764774677130654type III secretion system proteinQuickGO ontologyBLASTP
46771354677749615LEE-encoded type III secretion system factorQuickGO ontologyBLASTP
46777754678374600LEE-encoded type III secretion system factorQuickGO ontologyBLASTP
46783714678694324LEE-encoded chaperoneQuickGO ontologyBLASTP
46786984678916219LEE-encoded type III secretion system factorQuickGO ontologyBLASTP
46789314679302372enterocyte effacement LEE-encoded regulatorQuickGO ontologyBLASTP
468056546817611197LEE-encoded type III effectorQuickGO ontologyBLASTP
46818894682707819LEE-encoded type III secretion system factorQuickGO ontologyBLASTP
46837274684650924inner membrane proteinQuickGO ontologyBLASTP
46846544685472819cytoplasmic membrane lipoprotein-28QuickGO ontologyBLASTP
46856944685987294hypothetical proteinBLASTP
468602846872181191ribonucleoside transporterQuickGO ontologyBLASTP
46874524687805354hypothetical proteinBLASTP
46877894688112324hypothetical proteinBLASTP
46882284688680453hypothetical proteinBLASTP
469024146920071767cryptic adenine deaminaseQuickGO ontologyBLASTP
469205346934441392sugar phosphate antiporterQuickGO ontologyBLASTP
469358246949011320regulatory protein UhpCQuickGO ontologyBLASTP