Pre_GI Gene

Some Help

Host: NC_012811 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012811:410776 Methylobacterium extorquens AM1 megaplasmid, complete sequence

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4057884107794992hypothetical proteinBLASTP
4107764126981923hypothetical protein
4126854141151431hypothetical proteinBLASTP
414397415077681putative Hydrolase HAD superfamilyQuickGO ontologyBLASTP
415228415788561putative Shikimate kinaseQuickGO ontology
416082416522441hypothetical protein
4170854180951011putative metal ion transporterQuickGO ontologyBLASTP
418168418377210hypothetical protein
4183214198201500hypothetical proteinBLASTP
420165421064900hypothetical proteinBLASTP
421061421381321putative transcriptional regulatorQuickGO ontologyBLASTP
4218654230191155hypothetical proteinBLASTP
4230124252882277putative UBATHIF-type NADFAD binding fold proteinQuickGO ontologyBLASTP
425285426103819hypothetical proteinBLASTP
427672428664993hypothetical proteinBLASTP
428661429491831putative transcriptional regulatorQuickGO ontologyBLASTP
429699430502804hypothetical protein
430495430716222hypothetical protein
4308254319191095putative membrane-associated zinc metallopeptidaseQuickGO ontologyBLASTP
4319774330711095hypothetical proteinBLASTP
4330624341021041hypothetical proteinBLASTP
434099435094996hypothetical protein
4350914361881098hypothetical proteinBLASTP
4361854372371053hypothetical proteinBLASTP