Pre_GI: BLASTP Hits

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Query: NC_012811:410776:421061 Methylobacterium extorquens AM1 megaplasmid, complete sequence

Start: 421061, End: 421381, Length: 321

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008254:611437:611437611437611757321Mesorhizobium sp. BNC1, complete genometranscriptional regulator, XRE family2e-38157
NC_008380:2287327:230295523029552303281327Rhizobium leguminosarum bv. viciae 3841, complete genomeputative helix-turn-helix transcriptional regulatory protein2e-31134
NC_010995:1417329:141941314194131419736324Cellvibrio japonicus Ueda107, complete genomeHelix-turn-helix motif1e-2098.6
NC_008825:2525380:254043925404392540762324Methylibium petroleiphilum PM1, complete genomehelix-turn-helix protein2e-2097.4
NC_010170:4800000:489749048974904897813324Bordetella petrii, complete genomeHTH-type transcriptional regulator1e-1892
NC_004757:2730057:277686827768682777188321Nitrosomonas europaea ATCC 19718, complete genomeHelix-turn-helix motif1e-1891.7
NC_014910:465980:495325495325495654330Alicycliphilus denitrificans BC chromosome, complete genomehelix-turn-helix domain protein2e-1890.9
NC_011000:1216430:123284312328431233166324Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative DNA-binding protein3e-1890.5
NC_009076:75535:873628736287685324Burkholderia pseudomallei 1106a chromosome I, complete sequencetranscriptional regulator, XRE family3e-1890.5
NC_014540:2933853:295871529587152959032318Burkholderia sp. CCGE1003 chromosome 2, complete sequencehelix-turn-helix domain-containing protein4e-1890.1
NC_007645:6407370:641820964182096418529321Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator6e-1889.4
NC_008543:2220698:222946722294672229790324Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, XRE family2e-1684.3
NC_009256:3601080:361300036130003613326327Burkholderia vietnamiensis G4 chromosome 1, complete sequenceXRE family transcriptional regulator5e-1683.2
NC_007645:5801295:580985358098535810188336Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator2e-1580.9
NC_013194:4405764:441480444148044415130327Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completetranscriptional regulator, XRE family3e-1580.9
NC_007645:5724000:574088657408865741206321Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator7e-1579.3
NC_009706:1972000:199046619904661990768303Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein3e-0960.5
NC_010338:1216385:122403012240301224350321Caulobacter sp. K31, complete genometranscriptional regulator, XRE family1e-0652