Pre_GI Gene

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Host: NC_012791 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012791:2233098 Variovorax paradoxus S110 chromosome 1, complete genome

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
223309822348101713hypothetical proteinBLASTP
22349462235842897transcriptional regulator LysR familyQuickGO ontologyBLASTP
22358732236155283BLASTP
223619822373281131L-carnitine dehydratasebile acid-inducible protein FQuickGO ontologyBLASTP
22373362238310975hypothetical proteinBLASTP
223834522400541710acyl-CoA dehydrogenase domain proteinQuickGO ontologyBLASTP
22401612241069909transcriptional regulator LysR familyQuickGO ontologyBLASTP
22411922241683492GCN5-related N-acetyltransferaseQuickGO ontologyBLASTP
22417842242434651transcriptional regulator TetR familyQuickGO ontologyBLASTP
22427652243322558OsmC family proteinQuickGO ontologyBLASTP
224349822446401143Extracellular ligand-binding receptorQuickGO ontologyBLASTP
22447622245559798ABC transporter relatedQuickGO ontologyBLASTP
22455612246334774ABC transporter relatedQuickGO ontologyBLASTP
224635422475501197inner-membrane translocatorQuickGO ontologyBLASTP
22475642248493930inner-membrane translocatorQuickGO ontologyBLASTP
224860922498111203aminotransferase class I and IIQuickGO ontologyBLASTP
22498862250566681DSBA oxidoreductaseQuickGO ontologyBLASTP
22509532251120168BLASTP
22519502252867918transcriptional regulator AraC familyQuickGO ontologyBLASTP