Pre_GI: BLASTP Hits

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Query: NC_012791:2233098:2243498 Variovorax paradoxus S110 chromosome 1, complete genome

Start: 2243498, End: 2244640, Length: 1143

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014323:3976351:3980128398012839812701143Herbaspirillum seropedicae SmR1 chromosome, complete genomebranched-chain amino acid ABC transporter periplasmic protein4e-125448
NC_008702:4064470:4086174408617440872891116Azoarcus sp. BH72, complete genomeprobable leucine-specific binding protein4e-110398
NC_008702:4064470:4084668408466840857921125Azoarcus sp. BH72, complete genomeprobable leucine-specific binding protein4e-102371
NC_008825:2063990:2076133207613320772601128Methylibium petroleiphilum PM1, complete genomeputative secreted substrate binding protein2e-101369
NC_003296:1980687:1996311199631119974531143Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE LEUCINE-SPECIFIC BINDING PRECURSOR TRANSMEMBRANE PROTEIN4e-92338
NC_008543:323773:3252703252703264301161Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceExtracellular ligand-binding receptor4e-92338
NC_010557:679656:6890646890646901731110Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceExtracellular ligand-binding receptor3e-91335
NC_010676:2658495:2672337267233726734791143Burkholderia phytofirmans PsJN chromosome 2, complete sequenceExtracellular ligand-binding receptor7e-91334
NC_010805:575709:5947735947735959211149Burkholderia multivorans ATCC 17616 chromosome 2, completebranched-chain amino acid transport system substrate-binding protein3e-90332
NC_010086:1816378:1879383187938318805311149Burkholderia multivorans ATCC 17616 chromosome 2, completeExtracellular ligand-binding receptor3e-90332
NC_009255:1105786:1143156114315611443041149Burkholderia vietnamiensis G4 chromosome 2, complete sequenceextracellular ligand-binding receptor3e-90332
NC_016625:171341:2005792005792017031125Burkholderia sp. YI23 chromosome 2, complete sequenceextracellular ligand-binding receptor2e-86319
NC_016002:2652500:2665852266585226670001149Pseudogulbenkiania sp. NH8B, complete genomeextracellular ligand-binding receptor3e-78292
NC_015138:2025000:2036773203677320379121140Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeextracellular ligand-binding receptor1e-73277
NC_010552:335989:3383023383023394531152Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceExtracellular ligand-binding receptor7e-73274
NC_010681:74587:7995179951811291179Burkholderia phytofirmans PsJN chromosome 1, complete sequenceExtracellular ligand-binding receptor7e-68258
NC_010681:1234500:1249047124904712502101164Burkholderia phytofirmans PsJN chromosome 1, complete sequenceExtracellular ligand-binding receptor1e-59230
NC_015556:819503:8310258310258321461122Pseudomonas fulva 12-X chromosome, complete genomeExtracellular ligand-binding receptor5e-48192
NC_009436:2685910:2687061268706126881821122Enterobacter sp. 638, complete genomeextracellular ligand-binding receptor6e-46185
NC_011666:2259447:2259447225944722605651119Methylocella silvestris BL2, complete genomeExtracellular ligand-binding receptor2e-42172
NC_021066:1393750:1411247141124714123621116Raoultella ornithinolytica B6, complete genomeextracellular ligand-binding receptor3e-42172
NC_007946:3855445:3857693385769338588561164Escherichia coli UTI89, complete genomeleucine-specific binding protein precursor6e-42171
NC_005773:694990:6977246977246988601137Pseudomonas syringae pv. phaseolicola 1448A, complete genomehigh affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein6e-42171
NC_011742:3799788:3805228380522838063371110Escherichia coli S88 chromosome, complete genomeleucine ABC transporter subunit substrate-binding protein8e-42171
NC_008563:3888232:3890480389048038915891110Escherichia coli APEC O1, complete genomeleucine transporter subunit8e-42171
NC_011001:2517159:2520322252032225214401119Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative amino acid ABC transporter solute binding protein2e-39163
NC_010552:2089140:2092992209299220941101119Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceExtracellular ligand-binding receptor1e-39163
NC_015499:119200:1428541428541439931140Thermodesulfobium narugense DSM 14796 chromosome, complete genomeExtracellular ligand-binding receptor3e-39162
NC_008061:428501:4408634408634419811119Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceExtracellular ligand-binding receptor4e-39162
NC_008543:2035292:2037685203768520388031119Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceExtracellular ligand-binding receptor4e-39162
NC_010515:2358134:2372033237203323731511119Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceExtracellular ligand-binding receptor4e-39162
NC_007511:719493:7310787310787322771200Burkholderia sp. 383 chromosome 2, complete sequenceABC branched chain amino acid family transporter, periplasmic ligand binding protein5e-39162
NC_015224:279037:2812912812912825471257Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,branched-chain amino acid-binding protein1e-38160
NC_016745:675909:6971166971166982011086Oceanimonas sp. GK1 chromosome, complete genomeleucine ABC transporter subunit substrate-binding protein LivK1e-38160
NC_007946:3855445:3859797385979738609571161Escherichia coli UTI89, complete genomeLeu/Ile/Val-binding protein precursor1e-37157
NC_008563:3888232:3892584389258438937441161Escherichia coli APEC O1, complete genomeLeu/Ile/Val-binding protein precursor1e-37157
NC_011742:3799788:3807332380733238084351104Escherichia coli S88 chromosome, complete genomeleucine/isoleucine/valine transporter subunit ; periplasmic-binding component of ABC superfamily5e-37155
NC_011661:961129:9625519625519636811131Dictyoglomus turgidum DSM 6724, complete genomeExtracellular ligand-binding receptor2e-34146
NC_012658:545840:5468995468995480411143Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative high-affinity branched-chain amino acid ABC transporter amino acid-binding protein3e-34146
NC_011297:787932:7916897916897928191131Dictyoglomus thermophilum H-6-12, complete genomebranched chain amino acid ABC transporter2e-33143
NC_012108:3824977:3831173383117338323301158Desulfobacterium autotrophicum HRM2, complete genomeABC-typ branched-chain amino acid transport system, periplasmic substrate binding component8e-33141
NC_010511:5169338:5171493517149351725931101Methylobacterium sp. 4-46 chromosome, complete genomeextracellular ligand-binding receptor5e-32139
NC_020291:6426704:6442797644279764439511155Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeamino acid/amide ABC transporter substrate-binding protein, HAAT family7e-32138
NC_016906:3006748:3011458301145830126871230Gordonia polyisoprenivorans VH2 chromosome, complete genomeleucine-, isoleucine-, valine-, threonine-, and alanine-binding protein BraC2e-31136
NC_003155:7453994:7476683747668374779121230Streptomyces avermitilis MA-4680, complete genomeperiplasmic branched-chain amino acid-binding protein4e-31135
NC_010572:6463939:6489250648925064904431194Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative branched-chain amino acid ABC transporter substrate-binding protein1e-30134
NC_021177:1736854:1746033174603317472711239Streptomyces fulvissimus DSM 40593, complete genomeBranched chain amino acid binding protein2e-30133
NC_009617:3184924:3218440321844032196211182Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeextracellular ligand-binding receptor2e-29130
NC_013510:3324978:3334303333430333354451143Thermomonospora curvata DSM 43183, complete genomeExtracellular ligand-binding receptor2e-29130
NC_015953:1581542:1592724159272415939501227Streptomyces sp. SirexAA-E chromosome, complete genomeExtracellular ligand-binding receptor8e-29128
NC_003454:2080705:2100519210051921016701152Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeLeucine-, isoleucine-, valine-, threonine-, and alanine-binding protein1e-28127
NC_014831:786011:7933307933307945381209Thermaerobacter marianensis DSM 12885 chromosome, complete genomeamino acid/amide ABC transporter substrate-binding protein, HAAT family4e-28125
NC_016114:5539021:5563215556321555644501236Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeABC transporter substrate-binding protein5e-28125
NC_015318:1583839:1594624159462415957661143Hippea maritima DSM 10411 chromosome, complete genomeExtracellular ligand-binding receptor6e-27122
NC_015711:3085038:3107479310747931086571179Myxococcus fulvus HW-1 chromosome, complete genomeputative branched chain amino acid ABC transporter periplasmic amino acid-binding protein7e-27121
NC_016582:9422650:9443561944356194447781218Streptomyces bingchenggensis BCW-1 chromosome, complete genomebranched-chain amino acid transport system substrate-binding protein2e-26120
NC_010337:98974:1023691023691035711203Heliobacterium modesticaldum Ice1, complete genomebranched chain amino acid abc transporter, amino acid-binding protein7e-26118
NC_002937:614000:6169966169966181141119Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehigh-affinity branched chain amino acid ABC transporter, periplasmic branched chain amino acid-binding protein3e-25116
NC_008751:2774000:2794966279496627960841119Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeExtracellular ligand-binding receptor3e-25116
NC_013199:282901:2971212971212983141194Lactobacillus rhamnosus Lc 705, complete genomehigh affinity branched-chain amino acid ABC transporter, amino acid-binding protein, periplasmic component1e-24114
NC_013198:298000:3150883150883162811194Lactobacillus rhamnosus GG, complete genomehigh affinity branched-chain amino acid ABC transporter, amino acid-binding protein, periplasmic1e-24114
NC_011146:2200142:2235574223557422367671194Geobacter bemidjiensis Bem, complete genomeExtracellular ligand-binding receptor1e-24114
NC_013895:1282566:1295398129539812965551158Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completereceptor family ligand-binding protein6e-24112
NC_007503:2010858:2024141202414120253251185Carboxydothermus hydrogenoformans Z-2901, complete genomehigh affinity branched-chain amino acid ABC transporter, amino acid-binding protein1e-23111
NC_009437:2579161:2601627260162726028081182Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeextracellular ligand-binding receptor2e-23110
NC_008705:3201817:3209104320910432103151212Mycobacterium sp. KMS, complete genomeExtracellular ligand-binding receptor2e-23110
NC_013740:15401:1741117411185891179Acidaminococcus fermentans DSM 20731, complete genomeExtracellular ligand-binding receptor3e-23109
NC_015387:2072237:2073114207311420742381125Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeExtracellular ligand-binding receptor3e-23109
NC_014334:267409:2837182837182849111194Lactobacillus casei str. Zhang chromosome, complete genomebranched-chain amino acid ABC transporter periplasmic protein3e-23109
NC_015275:566000:5665635665635677501188Clostridium lentocellum DSM 5427 chromosome, complete genomeExtracellular ligand-binding receptor3e-23109
NC_010999:252605:2661492661492673421194Lactobacillus casei, complete genomeBranched-chain amino acid ABC transporter, substrate binding protein9e-23108
NC_008526:250000:2668772668772680701194Lactobacillus casei ATCC 334, complete genomeABC-type branched-chain amino acid transport system, periplasmic component9e-23108
NC_008278:5012000:5013384501338450145561173Frankia alni ACN14a, complete genomeputative branched chain amino acid binding protein precursor.1e-22107
NC_015578:61820:8915689156903461191Treponema primitia ZAS-2 chromosome, complete genomeextracellular ligand-binding receptor6e-22105
NC_012796:1645856:1667488166748816686631176Desulfovibrio magneticus RS-1, complete genomeputative ABC transporter substrate binding protein6e-22105
NC_007948:360199:3681863681863693161131Polaromonas sp. JS666, complete genomeExtracellular ligand-binding receptor5e-22105
NC_009953:188000:1903781903781915291152Salinispora arenicola CNS-205 chromosome, complete genomeextracellular ligand-binding receptor2e-21103
NC_013216:956461:9566369566369577781143Desulfotomaculum acetoxidans DSM 771, complete genomeExtracellular ligand-binding receptor2e-21103
NC_013939:913890:9285399285399296781140Deferribacter desulfuricans SSM1, complete genomebranched-chain amino acid ABC transporter substrate-binding protein8e-21101
NC_011060:2099255:2114243211424321153641122Pelodictyon phaeoclathratiforme BU-1, complete genomeExtracellular ligand-binding receptor2e-20100
NC_020409:437781:4564724564724576051134Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeExtracellular ligand-binding receptor3e-1893.2
NC_009483:2489000:2489003248900324901421140Geobacter uraniireducens Rf4 chromosome, complete genomeextracellular ligand-binding receptor3e-1893.2
NC_014614:2295131:2313207231320723143821176Clostridium sticklandii, complete genomeExtracellular ligand-binding receptor precursor3e-1893.2
NC_008148:2053467:2058442205844220596981257Rubrobacter xylanophilus DSM 9941, complete genomeExtracellular ligand-binding receptor3e-1892.8
NC_013592:3263005:3282449328244932835761128Dickeya dadantii Ech586, complete genomeExtracellular ligand-binding receptor7e-1892
NC_004193:701622:7224667224667236651200Oceanobacillus iheyensis HTE831, complete genomebranched-chain amino acid ABC transporter amino acid-binding protein5e-1789
NC_012587:3613162:3635526363552636367191194Rhizobium sp. NGR234, complete genomeputative extracellular ligand-binding receptor9e-1788.2
NC_009633:2137999:2158402215840221596101209Alkaliphilus metalliredigens QYMF chromosome, complete genomeextracellular ligand-binding receptor5e-1685.9
NC_016633:1898234:1899184189918419003501167Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomebranched-chain amino acid ABC transporter periplasmic protein7e-1685.1
NC_008786:2175064:2201499220149922027551257Verminephrobacter eiseniae EF01-2, complete genomeExtracellular ligand-binding receptor1e-1584.7
NC_011979:3045952:3066827306682730679661140Geobacter sp. FRC-32, complete genomeExtracellular ligand-binding receptor2e-1583.6
NC_013173:815696:8226388226388237831146Desulfomicrobium baculatum DSM 4028, complete genomeExtracellular ligand-binding receptor5e-1582.4
NC_016147:2820232:2829724282972428308841161Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeextracellular ligand-binding receptor6e-1582
NC_011979:3045952:3068002306800230691411140Geobacter sp. FRC-32, complete genomeExtracellular ligand-binding receptor1e-1481.3
NC_014972:2659388:2679672267967226808441173Desulfobulbus propionicus DSM 2032 chromosome, complete genomeHAAT family amino acid/amide ABC transporter substrate-binding protein2e-1480.1
NC_018691:896464:8964648964648976121149Alcanivorax dieselolei B5 chromosome, complete genomeABC-type branched-chain amino acid transport system, periplasmic component3e-1376.3
NC_016147:2820232:2831471283147128326521182Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeextracellular ligand-binding receptor6e-1375.5
NC_009376:1579332:1580401158040115817501350Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeextracellular ligand-binding receptor1e-1274.3
NC_008278:5012000:5014820501482050165261707Frankia alni ACN14a, complete genomePutative branched-chain amino acid ABC transporter, perisplasmic amino acid-binding protein2e-1273.6
NC_008786:5128363:5138340513834051394941155Verminephrobacter eiseniae EF01-2, complete genomeExtracellular ligand-binding receptor4e-1272.8
NC_010172:3712000:3729755372975537309481194Methylobacterium extorquens PA1, complete genomeExtracellular ligand-binding receptor9e-1271.6
NC_015656:2484749:2511587251158725132181632Frankia symbiont of Datisca glomerata chromosome, complete genomeExtracellular ligand-binding receptor1e-1171.2
NC_010725:3992948:4013070401307040142631194Methylobacterium populi BJ001, complete genomeExtracellular ligand-binding receptor2e-1170.5
NC_007963:1582089:1604636160463616058501215Chromohalobacter salexigens DSM 3043, complete genomeExtracellular ligand-binding receptor3e-1169.7
NC_008698:235688:2621872621872634641278Thermofilum pendens Hrk 5, complete genomeExtracellular ligand-binding receptor4e-1169.3
NC_010337:1051425:1069243106924310704091167Heliobacterium modesticaldum Ice1, complete genomebranched-chain amino acid abc transporter, substrate binding protein5e-1168.9
NC_008786:4216152:4233994423399442352261233Verminephrobacter eiseniae EF01-2, complete genomeExtracellular ligand-binding receptor7e-1168.6
NC_012796:1645856:1668660166866016697691110Desulfovibrio magneticus RS-1, complete genomeputative ABC transporter substrate binding protein precursor1e-1067.8
NC_008554:4839116:4848442484844248494611020Syntrophobacter fumaroxidans MPOB, complete genomeExtracellular ligand-binding receptor2e-1067.4
NC_014831:2133060:2141827214182721430561230Thermaerobacter marianensis DSM 12885 chromosome, complete genomeamino acid/amide ABC transporter substrate-binding protein, HAAT family2e-1067
NC_014153:1663597:1672566167256616737381173Thiomonas intermedia K12 chromosome, complete genomeExtracellular ligand-binding receptor3e-1066.2
NC_011060:459615:4689294689294701521224Pelodictyon phaeoclathratiforme BU-1, complete genomeExtracellular ligand-binding receptor4e-1066.2
NC_002939:2617037:2619301261930126204491149Geobacter sulfurreducens PCA, complete genomeABC transporter, periplasmic substrate-binding protein, putative4e-1066.2
NC_016147:3023180:3043998304399830451161119Pseudoxanthomonas spadix BD-a59 chromosome, complete genometwin-arginine translocation pathway signal5e-1065.9
NC_010170:1219641:1241603124160312428051203Bordetella petrii, complete genomeputative Substrate-binding periplasmic protein1e-0964.7
NC_004463:2158116:217841921784192179081663Bradyrhizobium japonicum USDA 110, complete genomesimilar to ABC transporter, amino acid binding protein1e-0964.3
NC_017249:7993713:810000081000008100398399Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-0963.5
NC_016645:1059482:1070059107005910714021344Pyrobaculum sp. 1860 chromosome, complete genomebranched-chain amino acid binding protein1e-0860.8
NC_014532:110875:1316501316501328851236Halomonas elongata DSM 2581, complete genomeABC-type transport system periplasmic substrate-binding protein1e-0860.8
NC_014830:3438504:3479347347934734805311185Intrasporangium calvum DSM 43043 chromosome, complete genomeExtracellular ligand-binding receptor1e-0860.8
NC_018524:4049990:4073626407362640748821257Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomereceptor ligand binding region family protein2e-0860.5
NC_009720:464078:4676714676714690081338Xanthobacter autotrophicus Py2, complete genomeextracellular ligand-binding receptor6e-0858.9
NC_004463:60225:7247072470747342265Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein1e-0757.8
NC_018000:1914945:1951030195103019522381209Sinorhizobium fredii USDA 257 chromosome, complete genomeextracellular ligand-binding receptor2e-0757.4
NC_019964:1873167:1899797189979719010381242Halovivax ruber XH-70, complete genomeABC-type branched-chain amino acid transport system, periplasmic component2e-0757.4
NC_018524:4049990:4072230407223040734531224Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomereceptor ligand binding region family protein3e-0756.6
NC_010729:1462135:1477342147734214784631122Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein3e-0756.6
NC_014641:20103:4203442034432091176Achromobacter xylosoxidans A8 plasmid pA81, complete sequenceextracellular ligand-binding receptor 65e-0755.8
NC_009437:2579161:2621677262167726229241248Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeextracellular ligand-binding receptor1e-0654.3
NC_007626:2204767:2207397220739722086501254Magnetospirillum magneticum AMB-1, complete genomeABC-type branched-chain amino acid transport systems1e-0654.3
NC_007953:572926:5807435807435819271185Burkholderia xenovorans LB400 chromosome 3, complete sequenceABC branched chain amino acid family transporter, periplasmic ligand binding protein5e-0652.8