Pre_GI Gene

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Host: NC_012791 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012791:2052923 Variovorax paradoxus S110 chromosome 1, complete genome

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
205292320539511029Spore coat U domain proteinQuickGO ontology
205394820562752328fimbrial biogenesis outer membrane usher proteinQuickGO ontologyBLASTP
20563102057038729P pilus assembly protein chaperone PapD-like proteinQuickGO ontologyBLASTP
20570642057570507Spore coat U domain proteinQuickGO ontologyBLASTP
2058176205827499hypothetical protein
205872620598441119polysaccharide export proteinQuickGO ontologyBLASTP
206000220612971296nucleotide sugar dehydrogenaseQuickGO ontologyBLASTP
20613142062261948oxidoreductase domain proteinQuickGO ontologyBLASTP
20622732062863591transferase hexapeptide repeat containing proteinQuickGO ontologyBLASTP
206286020639481089DegTDnrJEryC1StrS aminotransferaseQuickGO ontologyBLASTP
206401620653351320polysaccharide biosynthesis proteinQuickGO ontologyBLASTP
206544720666851239hypothetical proteinBLASTP
206672020679281209hypothetical protein
20679972068896900glycosyl transferase family 2QuickGO ontologyBLASTP
20689162069515600Undecaprenyl-phosphate galactose phosphotransferaseQuickGO ontologyBLASTP
20695082070482975protein of unknown function DUF201QuickGO ontologyBLASTP
20704692071134666HAD-superfamily hydrolase subfamily IA variant 1QuickGO ontologyBLASTP
207112820723061179Glutamine--scyllo-inositol transaminaseQuickGO ontologyBLASTP
20723782072707330VanZ family proteinQuickGO ontology
207270420746981995polysaccharide biosynthesis protein CapDQuickGO ontologyBLASTP
207475620770232268exopolysaccharide transport protein familyQuickGO ontologyBLASTP
20770202077454435protein tyrosine phosphataseQuickGO ontologyBLASTP
207748620804582973protein of unknown function DUF940 membrane lipoprotein putativeQuickGO ontologyBLASTP
20804552081093639lipoproteinQuickGO ontologyBLASTP
208180520831691365type III effector Hrp-dependent outersQuickGO ontologyBLASTP
208316920844401272Ribulose-bisphosphate carboxylaseQuickGO ontologyBLASTP
20844372084976540hypothetical proteinBLASTP