Pre_GI: BLASTN Hits

Some Help

Query: NC_012791:2052923 Variovorax paradoxus S110 chromosome 1, complete genome

Start: 2052923, End: 2084976, Length: 32054

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014931:5088125*5088125512272134597Variovorax paradoxus EPS chromosome, complete genome01848BLASTN svgBLASTP svg
NC_008782:31674403167440322216554726Acidovorax sp. JS42, complete genome1e-107398BLASTN svgBLASTP svg
NC_008781:33029343302934332709924166Polaromonas naphthalenivorans CJ2, complete genome1e-95359BLASTN svgBLASTP svg
NC_008752:10259801025980106353637557Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-89339BLASTN svgBLASTP svg
NC_007973:29520042952004297379621793Ralstonia metallidurans CH34 chromosome 1, complete sequence7e-51210BLASTN svgBLASTP svg
NC_019902:626934*62693464909922166Thioalkalivibrio nitratireducens DSM 14787, complete genome4e-46194BLASTN svgBLASTP svg
NC_008260:10154471015447103954324097Alcanivorax borkumensis SK2, complete genome5e-33151BLASTN svgBLASTP svg
NC_009439:2038303*2038303206823929937Pseudomonas mendocina ymp, complete genome5e-33151BLASTN svgBLASTP svg
NC_011662:12116601211660123662824969Thauera sp. MZ1T, complete genome8e-32147BLASTN svgBLASTP svg
NC_008314:36500365005712620627Ralstonia eutropha H16 chromosome 2, complete sequence3e-31145BLASTN svgBLASTP svg
NC_014323:4792048*4792048483609944052Herbaspirillum seropedicae SmR1 chromosome, complete genome1e-30143BLASTN svgBLASTP svg
NC_002516:35190003519000354507426075Pseudomonas aeruginosa PAO1, complete genome8e-29137BLASTN svgBLASTP svg
NC_010688:2781624*2781624283409952476Xanthomonas campestris pv. campestris, complete genome5e-21111BLASTN svgBLASTP svg
NC_002929:52500*525008147528976Bordetella pertussis Tohama I, complete genome7e-20107BLASTN svgBLASTP svg
NC_015379:1887275*1887275191854531271Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-18103BLASTN svgBLASTP svg
NC_014973:1941500*1941500196723925740Geobacter sp. M18 chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_012559:2663747*2663747271401150265Laribacter hongkongensis HLHK9, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_007348:21151522115152216024045089Ralstonia eutropha JMP134 chromosome 2, complete sequence7e-1797.6BLASTN svgBLASTP svg
NC_007759:41545641545644297727522Syntrophus aciditrophicus SB, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_006513:34865583486558351342826871Azoarcus sp. EbN1, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_007645:2779381*2779381283209952719Hahella chejuensis KCTC 2396, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_018691:18227311822731185319130461Alcanivorax dieselolei B5 chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_002927:11898211898216220243221Bordetella bronchiseptica RB50, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_010524:33910753391075341365222578Leptothrix cholodnii SP-6, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_015422:70450070450075861254113Alicycliphilus denitrificans K601 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_018691:1864796*1864796190445339658Alcanivorax dieselolei B5 chromosome, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_008781:36889653688965371374824784Polaromonas naphthalenivorans CJ2, complete genome7e-1487.7BLASTN svgBLASTP svg
NC_002928:12312612312616356640441Bordetella parapertussis 12822, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_011146:1998981*1998981205724258262Geobacter bemidjiensis Bem, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_007948:41765794176579420490428326Polaromonas sp. JS666, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_002932:22166122166124321221552Chlorobium tepidum TLS, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_005139:34350034350037669433195Vibrio vulnificus YJ016 chromosome I, complete sequence2e-1179.8BLASTN svgBLASTP svg
NC_014910:75519275519280336548174Alicycliphilus denitrificans BC chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_008570:3220539*3220539328055660018Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_014313:16549016549018947823989Hyphomicrobium denitrificans ATCC 51888 chromosome, complete3e-1075.8BLASTN svgBLASTP svg
NC_010645:73573735739609922527Bordetella avium 197N, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_012968:1108687*1108687113956830882Methylotenera mobilis JLW8, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_005966:69689696899119521507Acinetobacter sp. ADP1, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_007492:45639814563981458949625516Pseudomonas fluorescens PfO-1, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_004310:508483*50848353488526403Brucella suis 1330 chromosome I, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_006932:531000*53100055709926100Brucella abortus biovar 1 str. 9-941 chromosome I, complete2e-0869.9BLASTN svgBLASTP svg
NC_007618:52640052640055279626397Brucella melitensis biovar Abortus 2308 chromosome I, complete2e-0869.9BLASTN svgBLASTP svg
NC_010103:507482*50748253233624855Brucella canis ATCC 23365 chromosome I, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_010169:527500*52750055287125372Brucella suis ATCC 23445 chromosome I, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_010742:529500*52950055481725318Brucella abortus S19 chromosome 1, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_015857:531314*53131455683525522Brucella pinnipedialis B2/94 chromosome chromosome 1, complete2e-0869.9BLASTN svgBLASTP svg
NC_016024:1185388*1185388120989624509Candidatus Chloracidobacterium thermophilum B chromosome chromosome2e-0869.9BLASTN svgBLASTP svg
NC_009654:89449289449291290618415Marinomonas sp. MWYL1, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_013194:69634696349903729404Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete6e-0867.9BLASTN svgBLASTP svg
NC_015740:25873232587323260752820206Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete6e-0867.9BLASTN svgBLASTP svg
NC_018868:19605421960542201659956058Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_015388:2921000*2921000294759926600Desulfobacca acetoxidans DSM 11109 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007512:2024880*2024880207013145252Pelodictyon luteolum DSM 273, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002939:33039893303989333092426936Geobacter sulfurreducens PCA, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007492:43108284310828433716726340Pseudomonas fluorescens PfO-1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008740:29059902905990294863442645Marinobacter aquaeolei VT8, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012856:60476760476763328028514Ralstonia pickettii 12D chromosome 1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015424:3112637*3112637318003367397Aeromonas veronii B565 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_019897:128610*12861020195773348Thermobacillus composti KWC4 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_020209:997385*997385104138844004Pseudomonas poae RE*1-1-14, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_011831:24106072410607244905338447Chloroflexus aggregans DSM 9485, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009831:35838563583856360600922154Shewanella sediminis HAW-EB3, complete genome4e-0661.9BLASTN svgBLASTP svg